Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq69 232 8e-56
seq18 82.4 9e-11
>seq69
Length=174959
Score = 232 bits (256), Expect = 8e-56
Identities = 962/1502 (64%), Gaps = 28/1502 (2%)
Strand=Plus/Plus
Query 115876 AACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCA 115935
||||| ||||| || ||||| | | |||||||||| |||||| ||||| ||||||||
Sbjct 172256 AACTCGCCCGCCAGTACGCGTCGCTGGTAGATGTTGGACGTGTAAGGCTCGAAGCACTCG 172315
Query 115936 TTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTG 115995
||||| || | |||||| | ||| ||| || ||||| || |||| || || ||||||
Sbjct 172316 TTGTTGCCAAGGATTTGCGACGTGCTGGCCGTCGGCATAGGGGCCACCAGCAGACTGTTG 172375
Query 115996 CGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGT- 116054
|| | || | || | || | ||| ||| | ||||| || || |||| ||
Sbjct 172376 CGTATGCCATACTCCTTGATCTGCTCCCGGAGCGTTTCCCACTCCCAG---AGCTCTGAA 172432
Query 116055 --CTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAAT 116112
|| | ||| |||||||||||||||||| | || | ||||| |||||||| | |||
Sbjct 172433 GGCTTCACCTTCCACATATCAAACTGGAGCACGCCCTCCGACGCAGGCGATCCTTTAAAC 172492
Query 116113 GTCTCATATGGGCCCTCAACCTCCGCCAATTC---GGAGCTCGCCTCGAGGGCTGCGTGA 116169
| | || || || || || |||| || ||| || | || |||||
Sbjct 172493 GACGAGTAGGGCCCTTCGCTCTTTGCCAGCTCCATTGAG---GCAGTCAACGCGGCGTGG 172549
Query 116170 TACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGA 116229
|| || ||||| || || || | || |||||| || ||||||| |
Sbjct 172550 TAGATGGTCTCGAATATTTTCTGGTTTAGCTCCCGGGCCTCCGGAGACTCAAACGGCATG 172609
Query 116230 CGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTC 116289
||| | ||| |||| || || || |||||||| | ||||| || || || | |
Sbjct 172610 CGGAGAGCCAGAAAAGCATCAGCCAGGCCCTGGACACCAACACCAATCGGTCGGTGGCGC 172669
Query 116290 ATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGA 116349
|| || ||| | || || || || ||| || ||||| | |||||| ||
Sbjct 172670 ATGTTGCTGTTTTGGGCCTCTTCAACTGGGTAATGGTTGACGTCGATGATCCTATTGAGG 172729
Query 116350 TTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCT 116409
|| | ||| |||| || | || || ||||| | | | || | | || ||
Sbjct 172730 TTACGGACGACGACCTGCGTCACCTCGTGGAGCTTCTGGAAGTCGTAGCAGCCCTGGTCA 172789
Query 116410 TCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTA 116469
| | ||| | ||| ||||| | || |||||||| || |||| |||||
Sbjct 172790 TAGTCGACGAAGGCAGGCAGGGCTAGCGAGGCCAGATTGCAGACAGCAACTTCATCAGGT 172849
Query 116470 TCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTT 116529
||| |||||| | |||||||| || | || |||||| ||||||||||| |||||||
Sbjct 172850 GCAGAGTACTCAACGATTTCCGTGCAAAGGTTCGAACTCCGAATGGTGCCCAGGTTCTTT 172909
Query 116530 TGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTT 116589
||||| ||| ||| || ||||||||| ||||| | || | ||||| |||||
Sbjct 172910 TGATTGCTCTTGCGGTTGCAATGATCCTTGTACAGCATGAACGGGTTGCCCGTTTCCGTC 172969
Query 116590 TGGGACTT-GAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCC 116647
| | |||| || |||| | ||| | | || | || |||| || | | | || |
Sbjct 172970 T-GTACTTCCAGGATAGAATACCACAGCTTCTG-AGCCCGCACCGTCTTGCGGCCACGGC 173027
Query 116648 CCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGC-CTCTGAGAGC 116706
|||| |||||||||| ||| || |||||||| || || || ||| || | ||
Sbjct 173028 CCTCGCGCTCGTACTTTTCGTACAGAGCCTCAAATTCATC-GCCGTAGCAGTCGGCCAGA 173086
Query 116707 CCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATG 116766
|| || | | || || | ||| | ||| | ||| | ||| || |||||||||
Sbjct 173087 CCGGGACATTCGTTGGGGCACATGAGCGTCCAATCACCGTTTTTCTCCACGCGCTTCATG 173146
Query 116767 AAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCC 116826
|| ||||| || ||||| || || ||||||| || ||| ||| | || || | ||
Sbjct 173147 AACAGGTCGGGAATCCACAGGGCTAAGAAGAGGTCGCGAGCTCGAACCTCCTCCTTGCCA 173206
Query 116827 TGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCA-CGGTTCCAGGTACAC 116885
|| || ||||| |||| ||| || | || ||| || ||||| || |||||||| |
Sbjct 173207 TGGTTCTTGCGCAAATCCAGAAACTCAAAGACATCAGCATGCCATTGGCTCCAGGTATAT 173266
Query 116886 CGCGATTGACCCCTTGCGAC----GACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAA 116941
|| | | | ||| || | || |||||| || || | ||||| |||||
Sbjct 173267 GGC-AAAGGCACCTGGCCGCTTGTTGCCGCCCTGGTCGACGTAGCGGGCCGTGTTGTTAA 173325
Query 116942 ATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACT 117001
| || |||||||| ||||||| ||| | || || || || || ||| | |||
Sbjct 173326 AGACACGAAGCATGGGAATGACACCGTTCGAGGTCCCGTTGGTGCCGGCAATGCAAGAGC 173385
Query 117002 TGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTG 117061
| | || | || || | || | || || || || ||| ||| ||||| |
Sbjct 173386 CGGTAGCACGGATCCGATGCACGTTGAGCCCGATGCCACCGGCCATCTTAGAGATCATGG 173445
Query 117062 CGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGA 117121
||||| | |||| || |||| || || ||||| |||| |||| | | | |||||
Sbjct 173446 CGCACGTCTTGAGCGTGTCGTAAATGCCCTCGATGCTGTCATCCTTCATGTCAACGAGGA 173505
Query 117122 AGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGA 117181
|||| |||| ||| | || || ||||||||||| || | || | ||| |||
Sbjct 173506 AGCACGAGGACAGTTGGCACTGAGGCGTGCCAGCGTTGAACAGCGCCGGCGACGCATGGG 173565
Query 117182 TGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCC 117239
||| | | |||| |||||| | ||| || || | ||| | || | || ||
Sbjct 173566 TGA--AGAGCTTGCTGGACATGAGGTTGTACGTTTCGAGGACTCGGTCGATATTGTCGCC 173623
Query 117240 GTGAATACCGATTGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATC 117299
||||| | | || ||||| | ||||| |||||| || | | | || ||
Sbjct 173624 CCATATACCCACGGCAACGCGCATGATCATGTGTTGGGGGCGCTCAACGATCTTGCCGTC 173683
Query 117300 GAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATAGCCAAAGTCATAGTC 117359
|||| || | || ||| ||||| ||||||| |||||||| | ||| | ||||
Sbjct 173684 GAGCTTCAGCAGATAAGAACGCTCCAGAGTCTTGAAGCCAAAATACTGATAGTTAAAGTC 173743
Query 117360 CC 117361
||
Sbjct 173744 CC 173745
>seq18
Length=371689
Score = 82.4 bits (90), Expect = 9e-11
Identities = 155/226 (69%), Gaps = 4/226 (2%)
Strand=Plus/Plus
Query 12882 GCGTCAATTTCGTCAATGAAAACGATACACGGTTGATTTTCACGGGCAACTTCAAAGATA 12941
|||||||| || || ||||| | ||||| || ||| | ||| | || | || |
Sbjct 185188 GCGTCAATCTCATCGATGAAGATTATACATGGAGCATTCTTACGACCCTCTGCGAATAAG 185247
Query 12942 TCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGG--CGGCGGAAC 12999
|| || ||||| | ||||||||||||||||||||||| ||| | || | | ||
Sbjct 185248 TCGCGTACTCTGGACGAACCGACACCCACAAACATCTCCATAAACTCGGACCCACTGACG 185307
Query 13000 ATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCG 13059
| || |||| ||| || || || || |||| ||| ||||| || || ||||
Sbjct 185308 CT--GAAAAAGGCGACTCCTGACTCTCCAGCCGTGGCCTTGGCTAGGAGTGTTTTACCCG 185365
Query 13060 TCCCTGGTTTCCCCGCGAGAAGGGCACCACGTGGGATCCTGGCACC 13105
| || || || ||||||| |||||||| |||||| |||||||
Sbjct 185366 TGCCCGGAGGTCCGGCGAGAATAGCACCACGCGGGATCTTGGCACC 185411
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613502767410480
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