Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq70 122 1e-22
seq12 118 1e-21
>seq70
Length=137430
Score = 122 bits (134), Expect = 1e-22
Identities = 161/221 (73%), Gaps = 2/221 (1%)
Strand=Plus/Minus
Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438
|||| || || |||| || |||||||| || || || |||||| || || || |
Sbjct 82967 CGCAGGACGAGGTGCAGAGTGCTCTCCTTCTGTATGTTATAGTCGCTCAGGGTTCGGCCA 82908
Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498
|| ||||||||||| ||||| || || | |||||||||||||| || | || |||||||
Sbjct 82907 TCTTCGAGCTGCTTTCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTG 82848
Query 46499 TCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557
||| ||||| ||||| ||| | | | ||||| || ||||| || | |||||
Sbjct 82847 TCCTGAATCTTGGACTTGA-CGTTGTCGATGGTGTCAGAAGACTCCACCTCAAGAGTGAT 82789
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGC 46598
|| || || || || ||||| |||||||| ||||| ||||
Sbjct 82788 TGTCTTCCCTGTGAGGGTTTTGACAAAGATCTGCATCTTGC 82748
>seq12
Length=470578
Score = 118 bits (130), Expect = 1e-21
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 46376 AAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGC 46435
||||| | || || ||||| || ||| || ||||| ||||| ||||| ||||| ||
Sbjct 224102 AAACGAAGGACAAGGTGCAACGTGGACTCTTTCTGGATGTTGTAATCGGACAGAGTTCGG 224043
Query 46436 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCC 46495
| || || ||||||||||| || || |||| |||||| || || | || | | ||||
Sbjct 224042 CCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGATCAGGGGGAATACCCTCC 223983
Query 46496 TTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTG 46555
|||||| ||| ||| ||| | | | | |||||| |||||| || |||| |||
Sbjct 223982 TTGTCCTGGATTTTCGACTTCACATTATCGATGGTGTCGGACGATTCGACTTCCAAAGTG 223923
Query 46556 ATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || ||||| || | || || ||||||||||||||
Sbjct 223922 ATCGTCTTGCCAGTTAATGTCTTCACAAAGATTTGCAT 223885
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565234316152560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |