Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20yeast- like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq70 122 1e-22 seq12 118 1e-21 >seq70 Length=137430 Score = 122 bits (134), Expect = 1e-22 Identities = 161/221 (73%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| || || |||| || |||||||| || || || |||||| || || || | Sbjct 82967 CGCAGGACGAGGTGCAGAGTGCTCTCCTTCTGTATGTTATAGTCGCTCAGGGTTCGGCCA 82908 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || ||||||||||| ||||| || || | |||||||||||||| || | || ||||||| Sbjct 82907 TCTTCGAGCTGCTTTCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTG 82848 Query 46499 TCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 ||| ||||| ||||| ||| | | | ||||| || ||||| || | ||||| Sbjct 82847 TCCTGAATCTTGGACTTGA-CGTTGTCGATGGTGTCAGAAGACTCCACCTCAAGAGTGAT 82789 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGC 46598 || || || || || ||||| |||||||| ||||| |||| Sbjct 82788 TGTCTTCCCTGTGAGGGTTTTGACAAAGATCTGCATCTTGC 82748 >seq12 Length=470578 Score = 118 bits (130), Expect = 1e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 46376 AAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGC 46435 ||||| | || || ||||| || ||| || ||||| ||||| ||||| ||||| || Sbjct 224102 AAACGAAGGACAAGGTGCAACGTGGACTCTTTCTGGATGTTGTAATCGGACAGAGTTCGG 224043 Query 46436 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCC 46495 | || || ||||||||||| || || |||| |||||| || || | || | | |||| Sbjct 224042 CCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGATCAGGGGGAATACCCTCC 223983 Query 46496 TTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTG 46555 |||||| ||| ||| ||| | | | | |||||| |||||| || |||| ||| Sbjct 223982 TTGTCCTGGATTTTCGACTTCACATTATCGATGGTGTCGGACGATTCGACTTCCAAAGTG 223923 Query 46556 ATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || ||||| || | || || |||||||||||||| Sbjct 223922 ATCGTCTTGCCAGTTAATGTCTTCACAAAGATTTGCAT 223885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565234316152560