Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq24 158 1e-33
seq12 98.7 1e-15
seq14 93.3 4e-14
>seq24
Length=328731
Score = 158 bits (174), Expect = 1e-33
Identities = 345/508 (68%), Gaps = 18/508 (4%)
Strand=Plus/Minus
Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663
|| ||||| || || ||| || || ||||| || ||||| ||| | | || |||
Sbjct 174086 TTCTGATAGTCACCAACCCGCTTTTCGAAAAAGTTGGTTTTGCCCCCTAGCGATATGTTT 174027
Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACG 132720
||| ||||| ||||| || | | |||| ||| | |||| ||| |||||
Sbjct 174026 TCCATGAAATCAAAGGGATTTGACGACCTGTACATCTTTTCGTTGCC---CAGTGCGACG 173970
Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACAT---GGTTTCGCAATTAAGTCCC 132777
|| || | |||||| ||||||||||| || ||| ||| ||| || || | ||
Sbjct 173969 AGAAGGCGGTCGGCAACGAACTCGATATACTGCTTCATCAAGGTAGCG---TTCATGCCA 173913
Query 132778 AGCAGA-CGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGT 132836
|| | |||| ||||| |||||||| ||||| ||| ||||||||||| || |||||
Sbjct 173912 AGTAATGCGCAG-GGCAGGGCTTCGGTTAGAAATTCTTGTTCGATGGCGACGGCATCGGT 173854
Query 132837 GACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCA 132896
|| ||| || | | | ||| | ||| | | ||| | || | ||
Sbjct 173853 GATGATGTCATAGATGACCTGTTTGCTGGCCCGGTTTTTGAGGTGCGAGTGCAGGAGACA 173794
Query 132897 AGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCC 132956
|||||||| ||||| || || || | ||||||||||||||| || ||||||||
Sbjct 173793 TGCAAAGTCCGTGTGCAAACCTTCATCTCGCGAAATGAGTTCGTTGGAAAAGGTCAAGCC 173734
Query 132957 GGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGAC 133016
||||||||||| || || |||||||| || |||| ||| || || ||||||||
Sbjct 173733 AGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCACTAAAGAAGAT 173674
Query 133017 GCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACG-TG-GCTTCTTTGCTGGCG 133074
|||||||| || || || ||||||| ||| | | |||| || | || | | ||| |
Sbjct 173673 ACCCTCGACCGCGGCAAAGGCCACCAAGCGTTGAGCAAACGATGAGTTTTTGTCCTG--G 173616
Query 133075 ATCCAGCGCAGCGCCCATTCGGCCTTTT 133102
|||||||| | ||||| ||||||||||
Sbjct 173615 ATCCAGCGTATAGCCCAGTCGGCCTTTT 173588
Score = 138 bits (152), Expect = 1e-27
Identities = 196/275 (71%), Gaps = 3/275 (1%)
Strand=Plus/Minus
Query 133168 TAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAG 133227
||||| ||||| ||| || || | || ||||| | ||||||||| || |||||
Sbjct 173456 TAGGTATCGATCAGGAGGGAGTATGTCTCGGAGTGGATGTTCTCCATCATAATCTGAAAT 173397
Query 133228 CCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTT 133287
||||| ||||| || |||||| | ||| || || ||| ||||| |||| |||
Sbjct 173396 CCGTAGAAGCAACGGGCCTCGGGGATCTGAACCTCGCCGCTGAACCGCTCAACCAAGTTT 173337
Query 133288 TCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGC 133347
|| |||||||||||||| |||||||||||||||||| | ||| | ||||
Sbjct 173336 TCATTGACGATGCCGTCCGAGGCGGCGAAAAAGGCCAGGATGTGGGACACAAAATACTTT 173277
Query 133348 TCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCG 133404
|||| || |||| ||| | |||||| || ||||||||| || || | ||||||
Sbjct 173276 TCGTCATCATTCAGGCGGTTGTTCCAGTCATGCAAGTCCTTGGAGAGATCTATTTCCTCG 173217
Query 133405 ACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
| |||||||| || ||||| || || ||||||||
Sbjct 173216 GCTGTCCAAAATGAGGCCTCTGCCTTCTTGTACAT 173182
>seq12
Length=470578
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || || || || | || ||||| || ||||| | || ||||| | ||
Sbjct 223885 ATGCAAATCTTTGTGAAGACATTAACTGGCAAGACGATCACTTTGGAAGTCGAATCGTCC 223944
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || ||||||| ||||| ||||| |||||| | || |||
Sbjct 223945 GACACCATCGATAATGTGAAGTCGAAAATCCAGGACAAGGAGGGTATTCCCCCTGATCAA 224004
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || || | || ||||| ||||| || || | || || || ||| ||||||
Sbjct 224005 CAGCGCCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGAACTCTGTCCGATTACAAC 224064
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||| || || | ||| |||| | || || |||||| | |||||
Sbjct 224065 ATCCAGAAAGAGTCCACGTTGCACCTTGTCCTTCGTTTGCGCGGCGG 224111
Score = 86.0 bits (94), Expect = 6e-12
Identities = 153/218 (70%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||||||||| || || | ||||| || || || || | || || || | |
Sbjct 224113 ATGCAAATATTCGTCAAGACTTTGACGGGAAAGACGATTACTTTGGAAGTTGAATCTTCG 224172
Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | || || | | || ||||| | ||||| || || |||||| |||||||
Sbjct 224173 GATACGATTGACAATG-TGAAGTCGAAAATACAAGACAAGGAAGGCATTCCCCCCGACCA 224231
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|||||| ||||| | || || ||||| ||||| || | || || || | ||| |||||
Sbjct 224232 ACAGCGCCTCATATTTGCCGGAAAACAACTGGAAGATGGACGTACTCTGAGCGATTACAA 224291
Query 38423 CATCCA-AAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|| || |||| |||| || |||| | |||||||||
Sbjct 224292 TATTCAGAAAGAAAGC-ACTTTGCACCTTGTGCTGCGT 224328
>seq14
Length=772799
Score = 93.3 bits (102), Expect = 4e-14
Identities = 129/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || || |||||||||||||||||| |||| |||||| | | || | |
Sbjct 70028 TTCGTCAAGACCCTAACGGGCAAAACCATCACCCTCGAGGTCGAGTCGTCGGAAACGATC 69969
Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372
| | ||||| || || | || || |||| ||||| | || ||||| || ||
Sbjct 69968 GATAACTTTAAATCCAAGATTCAGGATAAGGAGGTTATTCCTCCGGATCAACAACGACTG 69909
Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432
|| | ||| ||||| ||||| || || | || ||||| ||| |||||||||||||||
Sbjct 69908 ATCTTCGCCGGCAAGCAGCTTGAAGATGGCCGAACCCTGTCCGATTACAACATCCAAAAG 69849
Query 38433 G 38433
|
Sbjct 69848 G 69848
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500169186251520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |