Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20yeast- like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq84 104 9e-17 seq14 96.9 1e-14 >seq84 Length=74915 Score = 104 bits (114), Expect = 9e-17 Identities = 242/363 (67%), Gaps = 3/363 (1%) Strand=Plus/Plus Query 451244 CCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATT 451303 ||||||||||| || || ||||| | ||||| ||| || || || || ||| || Sbjct 24050 CCTGAAGAAATCTCTTCGATGGTGTTGACTAAGATGCGCGAGACTGCCGAGAGCTATCTT 24109 Query 451304 GGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGG 451363 ||| | || || | || || || ||||| || || || ||||| || ||||| Sbjct 24110 GGTGGCACTGTCACCAACGCCGTCATCACTGTCCCTGCCTACTTCAACGACAGCCAACGT 24169 Query 451364 CAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAA 451423 ||||| || || || || || | ||||| ||| | ||||| || || |||||||| ||| Sbjct 24170 CAAGCCACCAAGGACGCCGGCCTCATTGCAGGTCTGAATGTCCTGCGCATTATTAACGAA 24229 Query 451424 CCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaT 451483 ||||| || ||||| | || ||||| || ||| || |||| | || || Sbjct 24230 CCTACGGCGGCTGCCATTGCTTATGGCCT-GGATAA--GAAAGTGGAGGGCGAGCGCAAC 24286 Query 451484 ATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGAT 451543 | | | ||||| || ||||| || || ||| || | ||| | ||||| || Sbjct 24287 GTCCTCATTTTTGACTTAGGTGGTGGTACATTCGATGTATCCCTCCTTACCATTGAGGAG 24346 Query 451544 GGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGAT 451603 || |||| || || ||| | || ||| ||||| ||||| || ||||| ||| | || Sbjct 24347 GGAATATTCGAGGTCAAGTCGACAGCTGGCGATACCCATCTTGGTGGTGAGGATTTCGAC 24406 Query 451604 AAT 451606 ||| Sbjct 24407 AAT 24409 >seq14 Length=772799 Score = 96.9 bits (106), Expect = 1e-14 Identities = 135/187 (72%), Gaps = 2/187 (1%) Strand=Plus/Minus Query 391054 ATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATA 391113 ||| |||||| || || || || || ||||| || || || || || || || || || | Sbjct 70033 ATAGTTTCGTCAAGACCCTAACGGGCAAAACCATCACCCTCGAGGTCGAGTCGTCGGAAA 69974 Query 391114 ACATTGA-AGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAA 391172 || || | || ||||| || ||||| |||||||| | |||||||| ||||||||| Sbjct 69973 CGATCGATAACT-TTAAATCCAAGATTCAGGATAAGGAGGTTATTCCTCCGGATCAACAA 69915 Query 391173 CGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATT 391232 || | || ||| | || || || ||||||||||| |||| || | ||||| || || Sbjct 69914 CGACTGATCTTCGCCGGCAAGCAGCTTGAAGATGGCCGAACCCTGTCCGATTACAACATC 69855 Query 391233 GATAAGG 391239 | |||| Sbjct 69854 CAAAAGG 69848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975703768570424