Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq84 104 9e-17
seq14 96.9 1e-14
>seq84
Length=74915
Score = 104 bits (114), Expect = 9e-17
Identities = 242/363 (67%), Gaps = 3/363 (1%)
Strand=Plus/Plus
Query 451244 CCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATT 451303
||||||||||| || || ||||| | ||||| ||| || || || || ||| ||
Sbjct 24050 CCTGAAGAAATCTCTTCGATGGTGTTGACTAAGATGCGCGAGACTGCCGAGAGCTATCTT 24109
Query 451304 GGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGG 451363
||| | || || | || || || ||||| || || || ||||| || |||||
Sbjct 24110 GGTGGCACTGTCACCAACGCCGTCATCACTGTCCCTGCCTACTTCAACGACAGCCAACGT 24169
Query 451364 CAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAA 451423
||||| || || || || || | ||||| ||| | ||||| || || |||||||| |||
Sbjct 24170 CAAGCCACCAAGGACGCCGGCCTCATTGCAGGTCTGAATGTCCTGCGCATTATTAACGAA 24229
Query 451424 CCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaT 451483
||||| || ||||| | || ||||| || ||| || |||| | || ||
Sbjct 24230 CCTACGGCGGCTGCCATTGCTTATGGCCT-GGATAA--GAAAGTGGAGGGCGAGCGCAAC 24286
Query 451484 ATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGAT 451543
| | | ||||| || ||||| || || ||| || | ||| | ||||| ||
Sbjct 24287 GTCCTCATTTTTGACTTAGGTGGTGGTACATTCGATGTATCCCTCCTTACCATTGAGGAG 24346
Query 451544 GGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGAT 451603
|| |||| || || ||| | || ||| ||||| ||||| || ||||| ||| | ||
Sbjct 24347 GGAATATTCGAGGTCAAGTCGACAGCTGGCGATACCCATCTTGGTGGTGAGGATTTCGAC 24406
Query 451604 AAT 451606
|||
Sbjct 24407 AAT 24409
>seq14
Length=772799
Score = 96.9 bits (106), Expect = 1e-14
Identities = 135/187 (72%), Gaps = 2/187 (1%)
Strand=Plus/Minus
Query 391054 ATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATA 391113
||| |||||| || || || || || ||||| || || || || || || || || || |
Sbjct 70033 ATAGTTTCGTCAAGACCCTAACGGGCAAAACCATCACCCTCGAGGTCGAGTCGTCGGAAA 69974
Query 391114 ACATTGA-AGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAA 391172
|| || | || ||||| || ||||| |||||||| | |||||||| |||||||||
Sbjct 69973 CGATCGATAACT-TTAAATCCAAGATTCAGGATAAGGAGGTTATTCCTCCGGATCAACAA 69915
Query 391173 CGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATT 391232
|| | || ||| | || || || ||||||||||| |||| || | ||||| || ||
Sbjct 69914 CGACTGATCTTCGCCGGCAAGCAGCTTGAAGATGGCCGAACCCTGTCCGATTACAACATC 69855
Query 391233 GATAAGG 391239
| ||||
Sbjct 69854 CAAAAGG 69848
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975703768570424
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |