Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20yeast- like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq84 138 9e-27 >seq84 Length=74915 Score = 138 bits (152), Expect = 9e-27 Identities = 521/807 (65%), Gaps = 14/807 (2%) Strand=Plus/Minus Query 517851 AATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTG 517910 |||| || || || |||| ||| |||| || |||| || || | ||| ||||| |||| Sbjct 24581 AATCGATACCCTCAAACAGAGAGTCAATCTCGATCGAGGTCTGTGCCGAGGAAGACAGTG 24522 Query 517911 CACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATT-C 517969 || || || || || || || || | |||| || | ||| |||| | || | Sbjct 24521 TGCGCTTGGCTCGCTCGCAGGCAGTGCGAAGTCGGCGAAGGGCACG-GCTGTTCGAGGAC 24463 Query 517970 AAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCA 518029 || || | || | || | |||||| || | || | | || | |||||| || Sbjct 24462 AAGTCCTTCTTGTGCTTGCGCTTGAATTCGTTCACGAAGTGGTTGACCAAACGATTGTCG 24403 Query 518030 AAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCT 518089 ||||| ||||| || | | |||| || | || | | || | ||| | ||| || Sbjct 24402 AAATCCTCACCACCAAGATGGGTATCGCCAGCTGTCGACTTGACCTCGAATATTCCCTCC 24343 Query 518090 TCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 518149 |||| | | || | |||||| || |||||||| | |||||||| || || || Sbjct 24342 TCAATGGTAAGGAGGGATACATCGAATGTACCACCACCTAAGTCAAAAATGAGGACGTTG 24283 Query 518150 ATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 518209 || || || ||||| || ||||| |||| ||||| || || ||||| ||| Sbjct 24282 CGCTCGCCCTCCACTTTCTTATCCAGGCCATAAGCAATGGCAGCCGCCGTAGGTTCGTTA 24223 Query 518210 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 518269 ||||| | || ||||| ||||| ||||| || || || || |||||||| | ||| Sbjct 24222 ATAATGCGCAGGACATTCAGACCTGCAATGAGGCCGGCGTCCTTGGTGGCTTGACGTTGG 24163 Query 518270 GAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAA 518329 ||||| || || ||||| ||||| || ||||| | || || ||||| ||| Sbjct 24162 CTGTCGTTGAAGTAGGCAGGGACAGTGATGACGGCGTTGGTGACAGTGCCACCAAGATA- 24104 Query 518330 GCGCTTGCC-GTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATA 518388 || || | | || | ||| ||| | || | ||| || || |||| ||| || | | Sbjct 24103 GCTCTCGGCAGTCTCGCGCATCTTAGTCAACACCATCGAAGAGATTTCTTCAGGTGTGAA 24044 Query 518389 TTGCTTGGATTCATT---TTGATATGATACTTCAAAATATGGTTTATTACCAACATTAAT 518445 | ||| ||| | |||| | | ||||| | || || | || || Sbjct 24043 TGTCTTC--TTCTCTCCCTTGAACTCA-ACTTCTATCACGGGCTTGCCGGCTTTATCAAC 23987 Query 518446 AACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGG--TCATTAAAATCTCTA 518503 || |||||| || | | ||||| || | ||||| || || || | || | | Sbjct 23986 AATTTTAAAAGGGAAATGCTTCATGTCGGCCTGAAC--TTCGGCATCGCTGAATTTGCGT 23929 Query 518504 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTG 518563 ||||| || || || ||||| || | ||| || || || || || |||||| || Sbjct 23928 CCAATCAACCGCTTCGCATCGAAGACAGTGTTATGAGGGTTCATGGCCACTTGATTCTTC 23869 Query 518564 GCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGA 518623 || ||||| |||||||| | ||||| || || || | || | || ||||| |||||| Sbjct 23868 GCGGCATCGCCAATCAGGCGCTCTGTGTCCGTGAAAGCGACGAAGGAGGGAGTGGTGCGA 23809 Query 518624 TTACCTTGATCATTCGCAATAATTTCA 518650 || ||||||||||| ||||| || ||| Sbjct 23808 TTGCCTTGATCATTGGCAATGATCTCA 23782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780793717736068