Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq84 138 9e-27
>seq84
Length=74915
Score = 138 bits (152), Expect = 9e-27
Identities = 521/807 (65%), Gaps = 14/807 (2%)
Strand=Plus/Minus
Query 517851 AATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTG 517910
|||| || || || |||| ||| |||| || |||| || || | ||| ||||| ||||
Sbjct 24581 AATCGATACCCTCAAACAGAGAGTCAATCTCGATCGAGGTCTGTGCCGAGGAAGACAGTG 24522
Query 517911 CACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATT-C 517969
|| || || || || || || || | |||| || | ||| |||| | || |
Sbjct 24521 TGCGCTTGGCTCGCTCGCAGGCAGTGCGAAGTCGGCGAAGGGCACG-GCTGTTCGAGGAC 24463
Query 517970 AAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCA 518029
|| || | || | || | |||||| || | || | | || | |||||| ||
Sbjct 24462 AAGTCCTTCTTGTGCTTGCGCTTGAATTCGTTCACGAAGTGGTTGACCAAACGATTGTCG 24403
Query 518030 AAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCT 518089
||||| ||||| || | | |||| || | || | | || | ||| | ||| ||
Sbjct 24402 AAATCCTCACCACCAAGATGGGTATCGCCAGCTGTCGACTTGACCTCGAATATTCCCTCC 24343
Query 518090 TCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 518149
|||| | | || | |||||| || |||||||| | |||||||| || || ||
Sbjct 24342 TCAATGGTAAGGAGGGATACATCGAATGTACCACCACCTAAGTCAAAAATGAGGACGTTG 24283
Query 518150 ATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 518209
|| || || ||||| || ||||| |||| ||||| || || ||||| |||
Sbjct 24282 CGCTCGCCCTCCACTTTCTTATCCAGGCCATAAGCAATGGCAGCCGCCGTAGGTTCGTTA 24223
Query 518210 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 518269
||||| | || ||||| ||||| ||||| || || || || |||||||| | |||
Sbjct 24222 ATAATGCGCAGGACATTCAGACCTGCAATGAGGCCGGCGTCCTTGGTGGCTTGACGTTGG 24163
Query 518270 GAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAA 518329
||||| || || ||||| ||||| || ||||| | || || ||||| |||
Sbjct 24162 CTGTCGTTGAAGTAGGCAGGGACAGTGATGACGGCGTTGGTGACAGTGCCACCAAGATA- 24104
Query 518330 GCGCTTGCC-GTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATA 518388
|| || | | || | ||| ||| | || | ||| || || |||| ||| || | |
Sbjct 24103 GCTCTCGGCAGTCTCGCGCATCTTAGTCAACACCATCGAAGAGATTTCTTCAGGTGTGAA 24044
Query 518389 TTGCTTGGATTCATT---TTGATATGATACTTCAAAATATGGTTTATTACCAACATTAAT 518445
| ||| ||| | |||| | | ||||| | || || | || ||
Sbjct 24043 TGTCTTC--TTCTCTCCCTTGAACTCA-ACTTCTATCACGGGCTTGCCGGCTTTATCAAC 23987
Query 518446 AACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGG--TCATTAAAATCTCTA 518503
|| |||||| || | | ||||| || | ||||| || || || | || | |
Sbjct 23986 AATTTTAAAAGGGAAATGCTTCATGTCGGCCTGAAC--TTCGGCATCGCTGAATTTGCGT 23929
Query 518504 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTG 518563
||||| || || || ||||| || | ||| || || || || || |||||| ||
Sbjct 23928 CCAATCAACCGCTTCGCATCGAAGACAGTGTTATGAGGGTTCATGGCCACTTGATTCTTC 23869
Query 518564 GCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGA 518623
|| ||||| |||||||| | ||||| || || || | || | || ||||| ||||||
Sbjct 23868 GCGGCATCGCCAATCAGGCGCTCTGTGTCCGTGAAAGCGACGAAGGAGGGAGTGGTGCGA 23809
Query 518624 TTACCTTGATCATTCGCAATAATTTCA 518650
|| ||||||||||| ||||| || |||
Sbjct 23808 TTGCCTTGATCATTGGCAATGATCTCA 23782
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780793717736068
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |