Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20yeast- like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq69 199 5e-46 >seq69 Length=174959 Score = 199 bits (220), Expect = 5e-46 Identities = 920/1437 (64%), Gaps = 36/1437 (3%) Strand=Plus/Minus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGG--AAGATATTGATTCT 111668 ||| || ||||| ||||||| || || | ||||| |||||| | |||| || Sbjct 173663 CCCCCAACACATGATCATGCGCGTTGCCGTGGGTAT--ATGGGGCGACAATATCGACCGA 173606 Query 111669 GTTTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTC 111728 || | || || ||| || |||||| | | |||| ||| || | || | || Sbjct 173605 GTCCTCGAAACGTACAACCTCATGTCCAGCAAGCTCTTCACCCATGCGTCGCCGGCGCTG 173546 Query 111729 TTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAG 111788 ||||||||||| || || |||| ||||| || ||||| ||| | ||||| Sbjct 173545 TTCAACGCTGGCACGCCTCAGTGCCAACTGTCCTCGTGCTTCCTCGTTGACATGAAGGAT 173486 Query 111789 GATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCT 111848 || ||| | |||||||||| ||| |||| || ||| ||||| ||| ||| Sbjct 173485 GACAGCATCGAGGGCATTTACGACACGCTCAAGACGTGCGCCATGATCTCTAAGATGGCC 173426 Query 111849 GGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACA 111908 ||||| |||||| | || | ||| || | || | | ||| | ||| || || Sbjct 173425 GGTGGCATCGGGCTCAACGTGCATCGGATCCGTGCTACCGGCTCTTGCATTGCCGGCACC 173366 Query 111909 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 111968 || || || | ||| | ||||| |||||||| || |||||| ||| || ||||| Sbjct 173365 AACGGGACCTCGAACGGTGTCATTCCCATGCTTCGTGTCTTTAACAACACGGCCCGCTAC 173306 Query 111969 GTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCC-ATG 112021 || |||| | || ||| || ||| || | || | || || ||||| ||| Sbjct 173305 GTCGACCAGGGCGGCAACAAGCG--GCCAGGTGCCT-TTGCCATATACCTGGAGCCAATG 173249 Query 112022 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCG 112081 ||| || ||| || | ||||| || || ||||| ||||| || | ||||||| || Sbjct 173248 GCATGCTGATGTCTTTGAGTTTCTGGATTTGCGCAAGAACCATGGCAAGGAGGAGGTTCG 173189 Query 112082 GTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 112141 ||||| ||||||| || || |||||||| || || ||||||||| | || ||| | Sbjct 173188 AGCTCGCGACCTCTTCTTAGCCCTGTGGATTCCCGACCTGTTCATGAAGCGCGTGGAGAA 173129 Query 112142 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGG 112201 | || ||||| | ||| | || || || | |||||||| |||| | || Sbjct 173128 AAACGGTGATTGGACGCTCATGTGCCCCAACGAATGTCCCGGTCTGGCCGACTGCTACGG 173069 Query 112202 TGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCG-GGCGACTGCGACGG 112260 || || ||||| || || ||| |||||||||| || | || ||| | ||||| Sbjct 173068 CGATGAATTTGAGGCTCTGTACGAAAAGTACGAGCGCGAGGGCCGTGGCCGC-AAGACGG 173010 Query 112261 TGCCAGCTGCCGATG-TGTGGAAAGCTATTCT-CAAGTCTCAAACCGAGACTGGTACACC 112318 ||| ||| | || | ||||| | |||| || |||| || || || || || | || Sbjct 173009 TGCGGGCT-CAGAAGCTGTGGTATTCTATCCTGGAAGT-ACAGACGGAAACGGGCAACCC 172952 Query 112319 ATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 112378 | ||||| ||||| || || |||| ||||| ||||||||||| |||| || Sbjct 172951 GTTCATGCTGTACAAGGATCATTGCAACCGCAAGAGCAATCAAAAGAACCTGGGCACCAT 172892 Query 112379 CAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGT 112438 |||||| ||||| || || |||||| | || | | | ||||| ||||| Sbjct 172891 TCGGAGTTCGAACCTTTGCACGGAAATCGTTGAGTACTCTGCACCTGATGAAGTTGCTGT 172832 Query 112439 GTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC--ATTT 112496 || || || || || | || || || | || || | ||| | | | | Sbjct 172831 CTGCAATCTGGCCTCGCTAGCCCTGCCTGCCTTCGTCGA--CTATGACCAGGGCTGCTAC 172774 Query 112497 GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATT 112556 || | | || |||||||| || ||| | ||| ||||| || || | || Sbjct 172773 GACTTCCAGAAGCTCCACGAGGTGACGCAGGTCGTCGTCCGTAACCTCAATAGGATCATC 172714 Query 112557 GATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATT 112616 || || |||||| ||||| || | || || ||| | ||||| || ||| Sbjct 172713 GACGTCAACCATTACCCAGTTGAAGAGGCCCAAAACAGCAACATGCGCCACCGACCGATT 172654 Query 112617 GGTCTCGGTGTCCAAGGTCTCGCGGATG-TATTCATTCTTTGTCGCCACGCATTTGATTC 112675 ||| | |||||||| || || || |||| | ||| || | ||| | ||||| || Sbjct 172653 GGTGTTGGTGTCCAGGGCCTGGCTGATGCTTTTCTGGCTCT-CCGCATGCCGTTTGAGTC 172595 Query 112676 CGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGA 112735 || || ||| | || | ||||| ||||| || || |||||||| |||| Sbjct 172594 TCCGGAGGCCCGGGAGCTAAACCAGAAAATATTCGAGACCATCTACCACGCCGC-GTTGA 172536 Query 112736 -GGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAG 112794 || |||| ||||| || || || || || | ||| | || || || | Sbjct 172535 CTGCCTCAATGGAGCTGGCAAAGAGCGAAGGGCCCTACTCGTCGTTTAAAGGATCGCCTG 172476 Query 112795 CTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACC----AAGCTTCACTAC 112850 | || | || ||||| || |||||||||| ||||||||| || |||| || Sbjct 172475 CGTCGGAGGGCGTGCTCCAGTTTGATATGT-GGAAGGTGAAGCCTTCAGAGCT---CTGG 172420 Query 112851 GACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATG 112910 || ||||| | ||| ||| | ||||||||| | || | || |||||||| || || Sbjct 172419 GAGTGGGAAACGCTCCGGGAGCAGATCAAGGAGTATGGCATACGCAACAGTCTGCTGGTG 172360 Query 112911 GCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCC 112970 || || ||||| || ||| ||| | |||||| | || || || || ||||| || || Sbjct 172359 GCCCCTATGCCGACGGCCAGCACGTCGCAAATCCTTGGCAACAACGAGTGCTTCGAGCCT 172300 Query 112971 TACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAAC 113027 |||||| | |||||||| | | || | || ||||| ||||| | | |||||| Sbjct 172299 TACACGTCCAACATCTACCAGCGACGCGTACTGGCGGGCGAGTTCCAGGTGGTCAAC 172243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620737915136160