Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20yeast- like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq18 87.8 2e-12 >seq18 Length=371689 Score = 87.8 bits (96), Expect = 2e-12 Identities = 162/235 (69%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 11673 CTTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTG 11732 ||| || | ||||||||||||||||||||| | ||||| || || ||| ||| Sbjct 185178 CTTGCCAATAGCGTCAATCTCATCGATGAAGATTATACATGGAGCATTCTTACGACCCTC 185237 Query 11733 TTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGC 11792 | |||| | || ||||| | || || ||||| || |||||||| | || | | Sbjct 185238 TGCGAATAAGTCGCGTACTCTGGACGAACCGACACCCACAAACATCTCCATAAACTCGGA 185297 Query 11793 GGCAGA-ACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAG 11851 || || ||||| |||| || ||||| ||||| |||| || ||||| | Sbjct 185298 CCCACTGACGCTGAAA-AAGGCGACTCCTGACTCTCCAGCCGTGGCCTTGGCTAGGAGTG 185356 Query 11852 TCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC 11906 | |||||||| || || | || ||||||| || ||||| |||||||||||||| Sbjct 185357 TTTTACCCGTGCCCGGAGGTCCGGCGAGAATAGCACCACGCGGGATCTTGGCACC 185411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588971744648400