Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20yeast- like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq69 179 4e-40 >seq69 Length=174959 Score = 179 bits (198), Expect = 4e-40 Identities = 722/1125 (64%), Gaps = 38/1125 (3%) Strand=Plus/Plus Query 105895 GTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGG 105954 |||||| | | ||||| ||||| || | || | | |||||||| | |||||| || Sbjct 172243 GTTGACCACCTGGAACTCGCCCGCCAGTACGCGTCGCTGGTAGATGTTGGACGTGTAAGG 172302 Query 105955 TTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCAT 106014 || ||||| || || || || | |||||| | ||| ||| || ||||| || |||| Sbjct 172303 CTCGAAGCACTCGTTGTTGCCAAGGATTTGCGACGTGCTGGCCGTCGGCATAGGGGCCAC 172362 Query 106015 CAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTA 106074 || |||||||| || | || | |||||||| | ||| ||| ||||| || | Sbjct 172363 CAGCAGACTGTTGCGTATGCCATACTCCTTGATCTGCTCCCGGAGCGTTTCCCACTCCCA 172422 Query 106075 GTTGAGCTT----GGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGG 106130 | |||| || |||||||||| |||||||||| || ||||| || | |||| | Sbjct 172423 G---AGCTCTGAAGGCTTCACCTTCC-ACATATCAAACTGGAGCACGCCCTCCGACGCAG 172478 Query 106131 GAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCA 106190 | || || | ||| | | |||| |||| | | |||| || || || Sbjct 172479 GCGATCCTTTAAACGACGAGTAGGGCCCTTCGCTCTTTGCCAGCTCCATTGAGGCAGTCA 172538 Query 106191 GGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAAT 106250 | ||||| || ||||| || || || || | |||| ||| || || | Sbjct 172539 ACGCGGCGTGGTAGATGGTCTCGAATATTTTCTGGTTTAGCTCCCGGGCCTCCGGAGACT 172598 Query 106251 CAA-----ATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACC 106305 ||| ||||| || | || |||| |||| || || || || ||||| | ||| Sbjct 172599 CAAACGGCATGCGGAGAGCCAGAAAA-----GCATCAGCCAGGCCCTGGACACCAACACC 172653 Query 106306 AATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTC 106365 ||| |||| ||| ||||| || ||| | || ||||| || ||| || ||| Sbjct 172654 AATCGGTCGGTGGCGCATGTTGCTGTTTTGGGCCTCTTCAACTGGGTAATGGTTGACGTC 172713 Query 106366 AATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATC 106425 |||| | || || || | || | || || | || || || || | | || Sbjct 172714 GATGATCCTATTGAGGTTACGGACGACGACCTGCGTCACCTCGTGGAGCTTCTGGAAGTC 172773 Query 106426 AAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAAC 106485 | || || | | ||| | || ||||| | || |||| |||||| || Sbjct 172774 GTAGCAGCCCTGGTCATAGTCGACGAAGGCAGGCAGGGCTAGCGAGGCCAGATTGCAGAC 172833 Query 106486 AGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAAT 106545 ||| ||||| | | |||||| | ||||| || || | ||| |||||| ||| Sbjct 172834 AGCAACTTCATCAGGTGCAGAGTACTCAACGATTTCCGTGCAAAGGTTCGAACTCCGAAT 172893 Query 106546 CGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGG 106605 || |||| |||||||| || ||||| |||||| ||||||||| |||||| | || Sbjct 172894 GGTGCCCAGGTTCTTTTGATTGCTCTTGCGGTTGCAATGATCCTTGTACAGCATGAACGG 172953 Query 106606 CGTCCCCGTCTCCGTCTGTGACTT-GAGAATTGCCTTCCACA-CATCGGCGGCTGGTACA 106663 | ||||| ||||||||| |||| || || | | ||||| | || | | | | || Sbjct 172954 GTTGCCCGTTTCCGTCTGT-ACTTCCAGGATAGAATACCACAGCTTCTGAGCCCG---CA 173009 Query 106664 ATGGCGT-TGGCC-CGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCAC 106721 | | | |||| || ||||| |||||||||| ||| || || ||||| || || | Sbjct 173010 CCGTCTTGCGGCCACGGCCCTCGCGCTCGTACTTTTCGTACAGAGCCTCAAATTCATCGC 173069 Query 106722 CCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCT 106781 | ||||| ||||| || | || || || | || | ||| | ||| | Sbjct 173070 CGTAGCAGTCGGCCAGACCGGGACATTCGTTGGGGCACATGAGCGTCCAATCACCGTTTT 173129 Query 106782 CCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACC 106841 ||| || ||||||||||| ||||| ||||||||||||| | | ||||| || | | | Sbjct 173130 TCTCCACGCGCTTCATGAACAGGTCGGGAATCCACAGGGCTAAGAAGAGGTCGCGAGCTC 173189 Query 106842 GAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCC 106901 || |||| || | || ||||| || || || || ||||| | || ||| || |||| Sbjct 173190 GAACCTCCTCCTTGCCATGGTTCTTGCGCAAATCCAGAAACTCAAAGACATCAGCATGCC 173249 Query 106902 A-TGGCTCAAGATAGACTGCGATAGATCC------CTT-TCGACGCCCAGCTTGATTTAC 106953 | |||||| || || | || | | || ||| | | ||||| || | || Sbjct 173250 ATTGGCTCCAGGTATATGGCAAAGGCACCTGGCCGCTTGTTGCCGCCC----TGGTCGAC 173305 Query 106954 ATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACC 106998 ||||| || ||| |||||| || |||||||| ||||| | ||| Sbjct 173306 GTAGCGGGCCGTGTTGTTAAAGACACGAAGCATGGGAATGACACC 173350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589976537388720