Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq24 82.4 9e-11
>seq24
Length=328731
Score = 82.4 bits (90), Expect = 9e-11
Identities = 220/334 (66%), Gaps = 7/334 (2%)
Strand=Plus/Minus
Query 19186 GTCTCTATAGAATTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATC 19245
||||| |||| ||| || ||||| | |||| | | | || || | ||| | ||| |||
Sbjct 173504 GTCTCAATAGCATTGAAGAGATAGGTCCGCTGAGCATTCTCCTTGATATAGGTATCGATC 173445
Query 19246 AATAAACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACAT 19305
| | ||| | || || || || || || || |||||||||||||| || ||
Sbjct 173444 AGGAGGGAGTATGTCTCGGAGTGGATGTTCTCCATCATAATCTGAAATCCGTAGAAGCAA 173385
Query 19306 CTTGCTTCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATT 19365
| || || | ||||| || || | | || | || ||||| |||||||| || ||
Sbjct 173384 CGGGCCTCGGGGATCTGAACCTCGCCGCTGAACCGCTCAACCAAGTTTTCATTGACGATG 173325
Query 19366 CCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATC-TGAGGT 19424
|| || || || ||||| || | | || | ||||| ||||| || | | |
Sbjct 173324 CCGTCCGAGGCGGCGAAAAAGGCCAGGATGTGGGACACAAAATACTTTTCGTCATCA--T 173267
Query 19425 TAATG----TATTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAA 19480
| | | | ||||| |||| | || || || | ||||| ||| || |||||||||
Sbjct 173266 TCAGGCGGTTGTTCCAGTCATGCAAGTCCTTGGAGAGATCTATTTCCTCGGCTGTCCAAA 173207
Query 19481 AAGAAGCCTCTGCTTTTTTATACATGTTCCATAT 19514
| || |||||||| || || ||||| | ||| ||
Sbjct 173206 ATGAGGCCTCTGCCTTCTTGTACATTTGCCAAAT 173173
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562104738763920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |