Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq12 131 1e-25
>seq12
Length=470578
Score = 131 bits (144), Expect = 1e-25
Identities = 147/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 101273 GTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCT 101332
|| || ||||| || || |||||||||| | ||||| | |||| || | ||||| ||
Sbjct 224081 GTGGACTCTTTCTGGATGTTGTAATCGGACAGAGTTCGGCCATCCTCAAGCTGCTTGCCA 224022
Query 101333 GCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTT 101392
||||| |||| ||||||||||| || ||||| || || || || || ||||| ||
Sbjct 224021 GCAAAGATCAGGCGCTGTTGATCAGGGGGAATACCCTCCTTGTCCTGGATTTTCGACTTC 223962
Query 101393 ACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTT 101452
||| | || | ||||| |||| ||| ||||| | ||||| ||| ||||| ||||| ||
Sbjct 223961 ACATTATCGATGGTGTCGGACGATTCGACTTCCAAAGTGATCGTCTTGCCAGTTAATGTC 223902
Query 101453 TTTACAAATATCTGCAT 101469
|| ||||| || |||||
Sbjct 223901 TTCACAAAGATTTGCAT 223885
Score = 122 bits (134), Expect = 7e-23
Identities = 142/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 101278 TTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAA 101337
|||||| || |||||||||||| | ||| | |||| |||| ||| || || |||||
Sbjct 224304 TTCTTTCTGAATATTGTAATCGCTCAGAGTACGTCCATCTTCCAGTTGTTTTCCGGCAAA 224245
Query 101338 TATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAAT 101397
||| | |||||||| ||||| ||||||||||| || ||||| ||||| || ||| |
Sbjct 224244 TATGAGGCGCTGTTGGTCGGGGGGAATGCCTTCCTTGTCTTGTATTTTCGACTTCACATT 224185
Query 101398 TTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTAC 101457
|| | || || || | ||| ||||| | ||| | ||| || || || ||||| || ||
Sbjct 224184 GTCAATCGTATCCGAAGATTCAACTTCCAAAGTAATCGTCTTTCCCGTCAAAGTCTTGAC 224125
Query 101458 AAATATCTGCAT 101469
||||| |||||
Sbjct 224124 GAATATTTGCAT 224113
Score = 91.5 bits (100), Expect = 1e-13
Identities = 128/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325
||| || ||||| || || || || ||||| |||| | || ||| |||| ||||| ||
Sbjct 223860 ATGTAGTGTAGACTCCTTCTGAATGTTGTAGTCGGACAAGGTCCTGCCATCCTCCAACTG 223801
Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385
|| || ||||| ||||| || ||||||||||| ||||| || || || || || || ||
Sbjct 223800 TTTTCCGGCAAAGATCAAGCGTTGTTGATCGGGAGGAATACCCTCCTTGTCCTGGATCTT 223741
Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
|| || | || | ||||| ||| | || || || || |||| ||| || || ||
Sbjct 223740 GGACTTGACGTTATCAATAGTGTTAGAGGACTCTACCTCTAGGGTGATCGTCTTTCCAGT 223681
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396275608466346
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |