Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq12 105 5e-18
seq70 87.8 1e-12
>seq12
Length=470578
Score = 105 bits (116), Expect = 5e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| |||| ||| | || | ||||| ||||| |||||||||||||| ||| | ||
Sbjct 224330 AGACGCAGCACAAGGTGCAAAGTGCTTTCTTTCTGAATATTGTAATCGCTCAGAGTACGT 224271
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || |||| || || ||||||||||| || |||||||| || | ||||| ||| |||
Sbjct 224270 CCATCTTCCAGTTGTTTTCCGGCAAATATGAGGCGCTGTTGGTCGGGGGGAATGCCTTCC 224211
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| || || || ||| | | | || || | || || |||| |||
Sbjct 224210 TTGTCTTGTATTTTCGACTTCACATTGTCAATCGTATCCGAAGATTCAACTTCCAAAGTA 224151
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||||| |||||||||||||| || || || || |||||
Sbjct 224150 ATCGTCTTTCCCGTCAAAGTCTTGACGAATATTTGCAT 224113
Score = 100 bits (110), Expect = 2e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 48569 CGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACC 48628
|||| |||||| || || |||||||| || ||| |||| | || || | |||||| ||
Sbjct 224082 CGTGGACTCTTTCTGGATGTTGTAATCGGACAGAGTTCGGCCATCCTCAAGCTGCTTGCC 224023
Query 48629 GGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTT 48688
||||| ||||| ||||||||||| | ||||| ||||||||||| || || ||
Sbjct 224022 AGCAAAGATCAGGCGCTGTTGATCAGGGGGAATACCCTCCTTGTCCTGGATTTTCGACTT 223963
Query 48689 TACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGT 48748
||| | | | | || |||| || || |||| || ||||| || || || || ||
Sbjct 223962 CACATTATCGATGGTGTCGGACGATTCGACTTCCAAAGTGATCGTCTTGCCAGTTAATGT 223903
Query 48749 TTTTACAAAAATCTGCAT 48766
|| ||||| || |||||
Sbjct 223902 CTTCACAAAGATTTGCAT 223885
>seq70
Length=137430
Score = 87.8 bits (96), Expect = 1e-12
Identities = 159/233 (68%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 48538 CGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAG 48597
|||| || | || |||| || | || || |||||||| || || || || || ||
Sbjct 82981 CGCCACCGCGCAGGCGCAGGACGAGGTGCAGAGTGCTCTCCTTCTGTATGTTATAGTCGC 82922
Query 48598 ATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGG 48657
|| |||| | || || | |||||| |||||||| || || ||||| || || | ||
Sbjct 82921 TCAGGGTTCGGCCATCTTCGAGCTGCTTTCCGGCAAAGATGAGGCGCTGCTGGTCGGGGG 82862
Query 48658 GAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCA 48717
||| |||||||||||| |||||| || || | | | || || | |||||
Sbjct 82861 GAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTCCA 82802
Query 48718 CCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770
|||| | || || || || || || | ||||| ||||| ||||||||| ||
Sbjct 82801 CCTCAAGAGTGATTGTCTTCCCTGTGAGGGTTTTGACAAAGATCTGCATCTTG 82749
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380934916532694
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |