Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20yeast- like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq69 336 4e-87 >seq69 Length=174959 Score = 336 bits (372), Expect = 4e-87 Identities = 1133/1736 (65%), Gaps = 66/1736 (4%) Strand=Plus/Plus Query 212696 GTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATC 212755 ||| || ||||| |||||| || || | ||| ||| || ||||| | | | | Sbjct 172030 GTTGAGCGACTGGGACTGGTCGATAAAAGCACCCCGGTCGGCCGCCATCTGCACCACCTG 172089 Query 212756 TCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGG 212815 || ||| || | |||||| ||||||||| | | | |||||| ||| | |||| | ||| Sbjct 172090 TCGCTGCGAAATCTCCCAGACGGTCTTGTAAAGTGCTTTGACGTCGGCGGGGATGTTGGG 172149 Query 212816 GATGTTCTGCACAGACCCCCTGTGT---ATGGTCAGCTGCAGGCGCATGTCCTCGTTCCA 212872 ||||||||| | ||||| | | ||| | | | | ||| | || ||| Sbjct 172150 GATGTTCTGTATGGACCCGTTTTCCGCAATGATTCGGTTCTT---CATCGCGTCCGACCA 172206 Query 212873 GAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCTGA 212932 | |||| | |||| ||||| ||| |||||||| | |||||| || || | Sbjct 172207 TAAGCCCAAGTCGACCAGATCCTTGAGCAGCCAGGGGTTGACCACCTGGAACTCGCCCGC 172266 Query 212933 GAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAG 212992 || || | | |||||| | ||| || ||||| ||||||| || ||||||||| || || Sbjct 172267 CAGTACGCGTCGCTGGTAGATGTTGGACGTGTAAGGCTCGAAGCACTCGTTGTTGCCAAG 172326 Query 212993 AATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTG 213052 || || | |||||||| || ||||| || |||||||| |||||||| | | || | Sbjct 172327 GATTTGCGACGTGCTGGCCGTCGGCATAGGGGCCACCAGCAGACTGTTGCGTATGCCATA 172386 Query 213053 CTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTT 213112 ||| ||| | ||| ||| | |||| ||||| | || ||| ||| Sbjct 172387 CTCCTTGATCTGCTCCCGGAGCGTTTCCCACTCCCAGAGCTCTGA-AGG--------CTT 172437 Query 213113 CACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGG-GGCTGCCCTGGTAA-GAG 213170 ||| |||||||| |||||||| | | ||| | | ||| ||| ||| || || Sbjct 172438 CACCTTCCACATATCAAACTGGAGCACGCCCT--CCGACGCAGGCGATCCTTTAAACGAC 172495 Query 213171 GAGTAGGGGCCAT-GCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGAT 213229 |||||||| || | |||| ||| ||||||| || || || || |||| |||||| Sbjct 172496 GAGTAGGGCCCTTCGCTCTTTG-CCAGCTCCATTGAGGCAGTCAACGCGGCGTGGTAGAT 172554 Query 213230 GGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCAT 213289 ||| || ||||| | | ||| |||| | |||||| || ||| || ||||| | Sbjct 172555 GGTCTCGAATATTTTCTGGTTTAGCTCCCGGGCCTCCGGAGACTCAAACGGCATGCGGA- 172613 Query 213290 GCGTTGGAACA-CATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGT 213348 | | ||| | |||||||||| |||||||| || | || || |||| ||| | || || Sbjct 172614 GAGCCAGAAAAGCATCAGCCAGGCCCTGGACACCAACACCAATCGGTCGGTGGCGCATGT 172673 Query 213349 TA--GACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTT 213406 | | |||| || ||| || | |||||| |||| |||||||||| | |||||||| Sbjct 172674 TGCTGTTTTGG-GC-CTCTTCAACTGGGTAATGGTTGACGTCGATGATCCTATTGAGGTT 172731 Query 213407 GCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTC 213466 ||| | | || | || || | | || | || | | | | | ||||| ||| Sbjct 172732 ACGGACGACGACCTGCGTCACCTCGTGGAGCTTCTGGAAGTCGTA---GCAGCCCTGGTC 172788 Query 213467 CTGC---ACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGA 213523 | || || |||||||||| | |||||| ||||| || || || || | || Sbjct 172789 ATAGTCGACGAAGGCAGGCAGGGCTAGCGAGGCCAGATTGCAGACAGCAACTTCATCAGG 172848 Query 213524 GTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTG 213583 | | |||||| | ||| || ||||| ||||| | || |||||||||||||||| Sbjct 172849 TGCAGAGTACTCAACGATTTCCGTGCAAAGGTTCGAACTCCGAATGGTGCCCAGGTTCTT 172908 Query 213584 GTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAG 213643 || || ||| |||| | ||||||||| |||||| | ||| || || || Sbjct 172909 TTGATTGCTCTTGCGGTTGCAATGATCCTTGTACAGCATGAACGGGTTGCCCGTTTCCGT 172968 Query 213644 CTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCC 213703 ||| |||| || ||| || | | ||| ||| | || | || | Sbjct 172969 CTGTACTTCCAGGATAGAATACCACAGCTTCTGAGCCCGCACC----GTCTTGCGGCCAC 173024 Query 213704 GGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCA 213762 || | | || |||||||| |||||| || | | ||||| | ||| || | ||| Sbjct 173025 GGCCCTCGCGCTCGTACTTTTCGTACAGAGCCTCAAATTCATCGCCGTAGCAGTCGGCCA 173084 Query 213763 GTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTG-ACTCTCTGC 213821 | || ||||| ||| |||||||| |||| || |||| | ||| || | || | Sbjct 173085 GACCGGGACATTCGTTGGGGCACATGAGCGTCCAATCACCGTTTT-TCTCCACGCGCTTC 173143 Query 213822 ATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACT 213881 ||||||||||| || | |||||| || ||| ||||| | | | ||| ||| Sbjct 173144 ATGAACAGGTCGGGAATCCACAGGGCTAAGAAGAGGTCGCGAGCTCGAACCTCCTCCTTG 173203 Query 213882 CCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCA-CGGCTCCATGTA 213940 ||| ||| ||||||| ||| ||||| ||||||| || || ||||| ||||||| ||| Sbjct 173204 CCATGGTTCTTGCGCAAATCCAGAAACTCAAAGACATCAGCATGCCATTGGCTCCAGGTA 173263 Query 213941 GATGGCAAAGGCGCCCGGCC---TCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTT 213997 ||||||||||| || |||| | |||||||||||||| || | |||| |||| Sbjct 173264 TATGGCAAAGGCACCTGGCCGCTTGTTGCCGCCCTGGTCGACGTAGCGGGCCGTGTTGTT 173323 Query 213998 GAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGA 214057 |||| || || | ||| | | ||||| || |||||||| || || || | || Sbjct 173324 AAAGACACGAAGCATGGGAATGACACCGTTCGAGGTCCCGTTGGTGCCGGCAATGCAAGA 173383 Query 214058 GCCGGAGGCCCTCA--GGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATC 214115 ||||| || | | | || || | |||||| ||||||||||| ||| |||||| Sbjct 173384 GCCGGTAGCACGGATCCGATG--CACGTTGAGCCCGATGCCACCGGCCATCTTAGAGATC 173441 Query 214116 ATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGC 214175 |||||||| | | | || || ||||| | ||||||||||| | | || | Sbjct 173442 ATGGCGCACGTCTTGAGCGTGTCGTAAATGCCCTCGATGCTGTCATCCTTCATGTCAACG 173501 Query 214176 AAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCA 214235 | |||||| || || ||| | | || ||||| |||||| |||| || ||| Sbjct 173502 AGGAAGCACGAGGACAGTTGGCACTGAGGCGTGCCAGCGTTGAACAGCGCCGGCGACGCA 173561 Query 214236 TGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGC 214295 ||| | | | |||| | || | ||| |||| || || |||||| |||| Sbjct 173562 TGGGTGAAGAGCTTGCTGGACATGAGGTTGTACGTTTCGAGGACT------CGGTCGATA 173615 Query 214296 TTGTGGATCTGTAGAGC----GCA--CCTCATCAGCATGTGCTGGGGCCTCTCTATGGGT 214349 |||| | | || | | ||| | ||| | |||||| ||||| | ||| | | | Sbjct 173616 TTGTCGCCCCATATACCCACGGCAACGCGCATGATCATGTGTTGGGGGCGCTC-AACGAT 173674 Query 214350 CCTTTGGGGCC---CTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGTA 214402 | ||| | | ||| ||||| || || ||||||||||||||||| ||||| || Sbjct 173675 C--TTGCCGTCGAGCTTCAGCAGATAAGAACGCTCCAGAGTCTTGAAGCCAAAATA 173728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931526069675520