Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq69 336 4e-87
>seq69
Length=174959
Score = 336 bits (372), Expect = 4e-87
Identities = 1133/1736 (65%), Gaps = 66/1736 (4%)
Strand=Plus/Plus
Query 212696 GTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATC 212755
||| || ||||| |||||| || || | ||| ||| || ||||| | | | |
Sbjct 172030 GTTGAGCGACTGGGACTGGTCGATAAAAGCACCCCGGTCGGCCGCCATCTGCACCACCTG 172089
Query 212756 TCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGG 212815
|| ||| || | |||||| ||||||||| | | | |||||| ||| | |||| | |||
Sbjct 172090 TCGCTGCGAAATCTCCCAGACGGTCTTGTAAAGTGCTTTGACGTCGGCGGGGATGTTGGG 172149
Query 212816 GATGTTCTGCACAGACCCCCTGTGT---ATGGTCAGCTGCAGGCGCATGTCCTCGTTCCA 212872
||||||||| | ||||| | | ||| | | | | ||| | || |||
Sbjct 172150 GATGTTCTGTATGGACCCGTTTTCCGCAATGATTCGGTTCTT---CATCGCGTCCGACCA 172206
Query 212873 GAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCTGA 212932
| |||| | |||| ||||| ||| |||||||| | |||||| || || |
Sbjct 172207 TAAGCCCAAGTCGACCAGATCCTTGAGCAGCCAGGGGTTGACCACCTGGAACTCGCCCGC 172266
Query 212933 GAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAG 212992
|| || | | |||||| | ||| || ||||| ||||||| || ||||||||| || ||
Sbjct 172267 CAGTACGCGTCGCTGGTAGATGTTGGACGTGTAAGGCTCGAAGCACTCGTTGTTGCCAAG 172326
Query 212993 AATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTG 213052
|| || | |||||||| || ||||| || |||||||| |||||||| | | || |
Sbjct 172327 GATTTGCGACGTGCTGGCCGTCGGCATAGGGGCCACCAGCAGACTGTTGCGTATGCCATA 172386
Query 213053 CTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTT 213112
||| ||| | ||| ||| | |||| ||||| | || ||| |||
Sbjct 172387 CTCCTTGATCTGCTCCCGGAGCGTTTCCCACTCCCAGAGCTCTGA-AGG--------CTT 172437
Query 213113 CACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGG-GGCTGCCCTGGTAA-GAG 213170
||| |||||||| |||||||| | | ||| | | ||| ||| ||| || ||
Sbjct 172438 CACCTTCCACATATCAAACTGGAGCACGCCCT--CCGACGCAGGCGATCCTTTAAACGAC 172495
Query 213171 GAGTAGGGGCCAT-GCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGAT 213229
|||||||| || | |||| ||| ||||||| || || || || |||| ||||||
Sbjct 172496 GAGTAGGGCCCTTCGCTCTTTG-CCAGCTCCATTGAGGCAGTCAACGCGGCGTGGTAGAT 172554
Query 213230 GGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCAT 213289
||| || ||||| | | ||| |||| | |||||| || ||| || ||||| |
Sbjct 172555 GGTCTCGAATATTTTCTGGTTTAGCTCCCGGGCCTCCGGAGACTCAAACGGCATGCGGA- 172613
Query 213290 GCGTTGGAACA-CATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGT 213348
| | ||| | |||||||||| |||||||| || | || || |||| ||| | || ||
Sbjct 172614 GAGCCAGAAAAGCATCAGCCAGGCCCTGGACACCAACACCAATCGGTCGGTGGCGCATGT 172673
Query 213349 TA--GACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTT 213406
| | |||| || ||| || | |||||| |||| |||||||||| | ||||||||
Sbjct 172674 TGCTGTTTTGG-GC-CTCTTCAACTGGGTAATGGTTGACGTCGATGATCCTATTGAGGTT 172731
Query 213407 GCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTC 213466
||| | | || | || || | | || | || | | | | | ||||| |||
Sbjct 172732 ACGGACGACGACCTGCGTCACCTCGTGGAGCTTCTGGAAGTCGTA---GCAGCCCTGGTC 172788
Query 213467 CTGC---ACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGA 213523
| || || |||||||||| | |||||| ||||| || || || || | ||
Sbjct 172789 ATAGTCGACGAAGGCAGGCAGGGCTAGCGAGGCCAGATTGCAGACAGCAACTTCATCAGG 172848
Query 213524 GTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTG 213583
| | |||||| | ||| || ||||| ||||| | || ||||||||||||||||
Sbjct 172849 TGCAGAGTACTCAACGATTTCCGTGCAAAGGTTCGAACTCCGAATGGTGCCCAGGTTCTT 172908
Query 213584 GTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAG 213643
|| || ||| |||| | ||||||||| |||||| | ||| || || ||
Sbjct 172909 TTGATTGCTCTTGCGGTTGCAATGATCCTTGTACAGCATGAACGGGTTGCCCGTTTCCGT 172968
Query 213644 CTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCC 213703
||| |||| || ||| || | | ||| ||| | || | || |
Sbjct 172969 CTGTACTTCCAGGATAGAATACCACAGCTTCTGAGCCCGCACC----GTCTTGCGGCCAC 173024
Query 213704 GGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCA 213762
|| | | || |||||||| |||||| || | | ||||| | ||| || | |||
Sbjct 173025 GGCCCTCGCGCTCGTACTTTTCGTACAGAGCCTCAAATTCATCGCCGTAGCAGTCGGCCA 173084
Query 213763 GTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTG-ACTCTCTGC 213821
| || ||||| ||| |||||||| |||| || |||| | ||| || | || |
Sbjct 173085 GACCGGGACATTCGTTGGGGCACATGAGCGTCCAATCACCGTTTT-TCTCCACGCGCTTC 173143
Query 213822 ATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACT 213881
||||||||||| || | |||||| || ||| ||||| | | | ||| |||
Sbjct 173144 ATGAACAGGTCGGGAATCCACAGGGCTAAGAAGAGGTCGCGAGCTCGAACCTCCTCCTTG 173203
Query 213882 CCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCA-CGGCTCCATGTA 213940
||| ||| ||||||| ||| ||||| ||||||| || || ||||| ||||||| |||
Sbjct 173204 CCATGGTTCTTGCGCAAATCCAGAAACTCAAAGACATCAGCATGCCATTGGCTCCAGGTA 173263
Query 213941 GATGGCAAAGGCGCCCGGCC---TCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTT 213997
||||||||||| || |||| | |||||||||||||| || | |||| ||||
Sbjct 173264 TATGGCAAAGGCACCTGGCCGCTTGTTGCCGCCCTGGTCGACGTAGCGGGCCGTGTTGTT 173323
Query 213998 GAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGA 214057
|||| || || | ||| | | ||||| || |||||||| || || || | ||
Sbjct 173324 AAAGACACGAAGCATGGGAATGACACCGTTCGAGGTCCCGTTGGTGCCGGCAATGCAAGA 173383
Query 214058 GCCGGAGGCCCTCA--GGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATC 214115
||||| || | | | || || | |||||| ||||||||||| ||| ||||||
Sbjct 173384 GCCGGTAGCACGGATCCGATG--CACGTTGAGCCCGATGCCACCGGCCATCTTAGAGATC 173441
Query 214116 ATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGC 214175
|||||||| | | | || || ||||| | ||||||||||| | | || |
Sbjct 173442 ATGGCGCACGTCTTGAGCGTGTCGTAAATGCCCTCGATGCTGTCATCCTTCATGTCAACG 173501
Query 214176 AAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCA 214235
| |||||| || || ||| | | || ||||| |||||| |||| || |||
Sbjct 173502 AGGAAGCACGAGGACAGTTGGCACTGAGGCGTGCCAGCGTTGAACAGCGCCGGCGACGCA 173561
Query 214236 TGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGC 214295
||| | | | |||| | || | ||| |||| || || |||||| ||||
Sbjct 173562 TGGGTGAAGAGCTTGCTGGACATGAGGTTGTACGTTTCGAGGACT------CGGTCGATA 173615
Query 214296 TTGTGGATCTGTAGAGC----GCA--CCTCATCAGCATGTGCTGGGGCCTCTCTATGGGT 214349
|||| | | || | | ||| | ||| | |||||| ||||| | ||| | | |
Sbjct 173616 TTGTCGCCCCATATACCCACGGCAACGCGCATGATCATGTGTTGGGGGCGCTC-AACGAT 173674
Query 214350 CCTTTGGGGCC---CTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGTA 214402
| ||| | | ||| ||||| || || ||||||||||||||||| ||||| ||
Sbjct 173675 C--TTGCCGTCGAGCTTCAGCAGATAAGAACGCTCCAGAGTCTTGAAGCCAAAATA 173728
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931526069675520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |