Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq69 165 2e-35
seq24 98.7 2e-15
>seq69
Length=174959
Score = 165 bits (182), Expect = 2e-35
Identities = 778/1220 (64%), Gaps = 38/1220 (3%)
Strand=Plus/Plus
Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGA 221476
|||| || ||||||||||||||||| || || ||| ||| || | |||||| |||
Sbjct 172535 GTCAACGCGGCGTGGTAGATGGTCTCGAATATTTTCTGGTTTAGCTCCCGGGCCTCCGGA 172594
Query 221477 GAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCG 221536
|| || ||||| || || | |||| | || ||||| ||||| || || | |||
Sbjct 172595 GACTCAAACGGCATGCGGAGAGCCAGAAAAGCATCAGCCAGGCCCTGGACACCAACACCA 172654
Query 221537 ATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGT 221594
|| || | ||| | | ||||| | || || ||| || || ||| ||||||||
Sbjct 172655 ATCGGTCGGTGGCGCATGTTGCTGTTTTGG--GCCTCTTCAACTGGGTAATGGTTGACGT 172712
Query 221595 CGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGAT 221654
|||| | | |||||||| | || ||| | ||||||| |||||||||
Sbjct 172713 CGATGATCCTATTGAGGTTACGGACGACGACCTGCGTCACCTCGTGGAGCTTCTGG---- 172768
Query 221655 TGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGG 221714
|| ||| || | | ||| || || || || ||||| | ||
Sbjct 172769 --------AAGTCGTAGCAGCCCTGGTCATAGTCGACGAAGGCAGGCAGGGCTAGCGAGG 172820
Query 221715 CCAGGTTACACACGGCCACCTCGTCCTTGTTG--GTATACTGTATGATCTCTGTACAGAG 221772
|||| || || || || || || || | || | |||| | ||| || || || ||
Sbjct 172821 CCAGATTGCAGACAGCAACTTCATCA--GGTGCAGAGTACTCAACGATTTCCGTGCAAAG 172878
Query 221773 GTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTT 221832
||| | | ||||| ||||||| || ||||| |||||| ||| | |||||
Sbjct 172879 GTTCGAACTCCGAATGGTGCCCAGGTTCTTTTGATTGCTCTTGCGGTTGCAATGATCCTT 172938
Query 221833 GTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTC 221892
||| ||||| || || ||| || ||| ||| | |||| || | ||| || |
Sbjct 172939 GTACAGCATGAACGGGTTGCCCGTTTCCGTCTGTACTTCCAGGATAGAATACCACAGCT- 172997
Query 221893 TCTG-GCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCA 221951
|||| || | ||||||| | | | |||||| || | | || || |||||
Sbjct 172998 TCTGAGCCCGCACCGTCTTGCGGCCACGGCCCTCGCGCTCGTACTTTTCG-TACAGAGCC 173056
Query 221952 TGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGAC 222011
| |||| | || ||||| ||| |||| || ||||| | ||| ||||| ||
Sbjct 173057 T--CAAATTCATCGCCGTAGCAGTCGGCCAGACCGGGACATTCGTTGGGGCACATGAGCG 173114
Query 222012 TCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAA 222071
|||| | ||| | | || | || |||||| ||||| || |||||||| || |
Sbjct 173115 TCCAATCACCGTTTTTCTCCACGCGCTTCATGAACAGGTCGGGAATCCACAGGGCTAAGA 173174
Query 222072 AGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAA 222131
|||| || | | || ||||||| ||| | ||| || | || ||||| ||||||||
Sbjct 173175 AGAGGTCGCGAGCTCGAACCTCCTCCTTGCCATGGTTCTTGCGCAAATCCAGAAACTCAA 173234
Query 222132 AAATGTCAGCGTGCCAC-GGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCA 222190
| | ||||| ||||| |||||||| || | ||| | || || || |||||||||||
Sbjct 173235 AGACATCAGCATGCCATTGGCTCCAGGTATATGGCAAAGGCACCTGGCCGCTTGTTGCCG 173294
Query 222191 CCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTG 222250
||||| || || | || ||| |||| ||||| | || | | |||||
Sbjct 173295 CCCTGGTCGACGTAGCGGGCCGTGTTGTTAAAGACACGAAGCATGGGAATGACACCGTTC 173354
Query 222251 GATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCA--GGTTACTGGCAGACA 222308
|| ||||||||||| |||| | | ||| || | | | | | | | |
Sbjct 173355 GAGGTCCCGTTGGTGCCGGCAATGCAAGAGCCGGTAGCACGGATCCGATGCACGTTG--A 173412
Query 222309 TGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGC 222368
||||| |||||||| || |||||||||||||| ||||||| ||||| ||||
Sbjct 173413 GCCCGATGCCACCGGCCATCTTAGAGATCATGGCGCACGTCTTGAGCGTGTCGTAAATGC 173472
Query 222369 CCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGG 222428
|||| || ||| ||||| | || | || || || || |||| || | | | |
Sbjct 173473 CCTCGATGCTGTCATCCTTCATGTCAACGAGGAAGCACGAGGACAGTTGGCACTGAGGCG 173532
Query 222429 AACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGC-CCCTAGACATCAGATCG 222487
| ||||| ||||||| || || || || ||| ||| || ||||| || | |
Sbjct 173533 TGCCAGCGTTGAACAGCGCCGGCGACGCATGGGTGAAG-AGCTTGCTGGACATGAGGTTG 173591
Query 222488 TACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTAC 222547
||||| || | ||||| | |||| ||||| || || || ||| | |||| |
Sbjct 173592 TACGTTTCGAGGACTCGGTCGATATTGTCGCCCCATATACCCACGGCAACGCGCATGATC 173651
Query 222548 ATGTACTGGGGCCTCTCCACAGGAC---CCTTGGAGCTGGAGAGCAGGTACGATTTTTCC 222604
|||| ||||| | ||| || | | || | ||||| ||||| || || |||
Sbjct 173652 ATGTGTTGGGGGCGCTCAAC-GATCTTGCCGTCGAGCT--TCAGCAGATAAGAACGCTCC 173708
Query 222605 AGAGTCTTGAACCCAAAGTA 222624
||||||||||| ||||| ||
Sbjct 173709 AGAGTCTTGAAGCCAAAATA 173728
Score = 123 bits (136), Expect = 5e-23
Identities = 139/186 (75%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 221065 CATCTCGTCCGTCCATAGACCCCTCTCTTCCAGCACCTTGACCATGTGCTTGTTCACCAC 221124
|||| |||||| ||||| ||| || |||| |||||| || ||| |||||
Sbjct 172192 CATCGCGTCCGACCATAAGCCCAAGTCGACCAGATCCTTGAGCAGCCAGGGGTTGACCAC 172251
Query 221125 TTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGTTCGATGCT 221184
||||| || |||| || || | | |||||| | ||| || ||| | || |||| ||
Sbjct 172252 CTGGAACTCGCCCGCCAGTACGCGTCGCTGGTAGATGTTGGACGTGTAAGGCTCGAAGCA 172311
Query 221185 CTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCAGACT 221244
|||||||||||| ||||| || | ||||||||| || ||||| || ||||||||||||||
Sbjct 172312 CTCGTTGTTGCCAAGGATTTGCGACGTGCTGGCCGTCGGCATAGGGGCCACCAGCAGACT 172371
Query 221245 GTTGCG 221250
||||||
Sbjct 172372 GTTGCG 172377
>seq24
Length=328731
Score = 98.7 bits (108), Expect = 2e-15
Identities = 285/444 (64%), Gaps = 13/444 (3%)
Strand=Plus/Plus
Query 25883 TGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCT 25942
|||| |||||||| || || ||||| ||||| || || ||| | ||||| |||||||||
Sbjct 173648 TGGTGGCCTTTGCCGCGGTCGAGGGTATCTTCTTTAGTGGTGCCTTTGCCTCCATCTTCT 173707
Query 25943 GGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGG 26002
|||||||| || || |||||| || || |||||||||||| ||||| | |
Sbjct 173708 GGCTCAAGAAGCGTGGCCTCATGCCTGGCTTGACCTTTTCCAACGAACTCATTTCGCGAG 173767
Query 26003 ACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAAC 26062
| || ||| | |||| || ||||| || || || || || ||| | || ||||
Sbjct 173768 ATGAAGGTTTGCACACGGACTTTGCATGTCTCCTGCACTCG---CACCT----CAAAAAC 173820
Query 26063 CTTCTC----AAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAG 26118
| | || || | |||| ||||||| || || || | ||||| | ||
Sbjct 173821 CGGGCCAGCAAACAGGTCATCTATGACATCATCACCGATGCCGTCGCCATCGAACAAGAA 173880
Query 26119 TTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAA 26178
|||| | ||||||||| | | |||| ||
Sbjct 173881 TTTCTAACCGAAGCCCTGCCCTGCGCATTACTTGGCATGAACGCTACCTTGATGAAGCAG 173940
Query 26179 TACATTGAGTATGTGGCCGACCATCTGCT-GTGCCAGCTGGGACTCGCCAGACTCTACAG 26237
|| || |||| || ||||||| || || || || ||||| || | | |||||
Sbjct 173941 TATATCGAGTTCGTTGCCGACCGCCTTCTCGTCGCA-CTGGGCAACGAAAAGATGTACAG 173999
Query 26238 TACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTT 26297
|| | || || || || || ||||||||||||||| | | || || |||||||| ||
Sbjct 174000 GTCGTCAAATCCCTTTGATTTCATGGAAAACATATCGCTAGGGGGCAAAACCAACTTTTT 174059
Query 26298 TGAAAAGAGGGTCGGCGACTATCA 26321
|||||| |||| || ||||||||
Sbjct 174060 CGAAAAGCGGGTTGGTGACTATCA 174083
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928838089096320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |