Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20yeast- like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq12 84.2 2e-11 >seq12 Length=470578 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||||||||| || || || || ||||| || || ||||| ||| ||| |||| Sbjct 224113 ATGCAAATATTCGTCAAGACTTTGACGGGAAAGACGATTACTTTGGAAGTTGAATCTTCG 224172 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || ||| | | | || | ||| ||||| ||||| || || | ||| || ||| Sbjct 224173 GATACGATTGACAATGTGAAGTCGAAAATACAAGACAAGGAAGGCATTCCCCCCGACCAA 224232 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||| | || || ||||| || |||||| |||||||| ||| || |||||| || Sbjct 224233 CAGCGCCTCATATTTGCCGGAAAACAACTGGAAGATGGACGTACTCTGAGCGATTACAAT 224292 Query 28734 ATTCAAAAAGAATCTACTCTGCAC 28757 ||||| |||||| ||| ||||| Sbjct 224293 ATTCAGAAAGAAAGCACTTTGCAC 224316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425401803289062