Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq84 129 4e-24
seq12 118 7e-21
>seq84
Length=74915
Score = 129 bits (142), Expect = 4e-24
Identities = 327/492 (66%), Gaps = 14/492 (3%)
Strand=Plus/Plus
Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451
|| || ||||||||||| ||||| ||| | || || || || | || |||| || ||
Sbjct 23783 GAGATCATTGCCAATGATCAAGGCAATCGCACCACTCCCTCCTTCGTCGCTTTCACGGAC 23842
Query 474452 ACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACT 474511
|| || | || ||||| ||||| || || |||||| || || ||| ||| |||
Sbjct 23843 ACAGAGCGCCTGATTGGCGATGCCGCGAAGAATCAAGTGGCCATGAACCCTCATAACACT 23902
Query 474512 ATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGAT 474571
| || ||||| || | |||||||| || || || ||| || || || | ||
Sbjct 23903 GTCTTCGATGCGAAGCGGTTGATTGGACGCAAATTCAGCGATGCCGAAGTTCAGGCCGAC 23962
Query 474572 ATGCGTCATTGGCCTTTTAA----GGTGATAAATGTTGGTGGTAAACCATATATAGAAGC 474627
||| |||| |||||||| | ||||||| | || || || |||||||
Sbjct 23963 ATGAAGCATTTCCCTTTTAAAATTGTTGATAAA----GCCGGCAAGCCCGTGATAGAAGT 24018
Query 474628 --AATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTA 474685
| | || | || || | || ||| |||| ||| |||| ||||| ||||| ||
Sbjct 24019 TGAGTTCAAG--GGAGAGAAGAAGACATTCACACCTGAAGAAATCTCTTCGATGGTGTTG 24076
Query 474686 GCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAAT 474744
| || ||| | || || ||| | |||||||| || || | || || ||
Sbjct 24077 ACTAAGATGCGCGAGACTGCCGAGAGC-TATCTTGGTGGCACTGTCACCAACGCCGTCAT 24135
Query 474745 TACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAAT 474804
||||| || || || || || || ||||||||||| || || || || || ||
Sbjct 24136 CACTGTCCCTGCCTACTTCAACGACAGCCAACGTCAAGCCACCAAGGACGCCGGCCTCAT 24195
Query 474805 TGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864
||||||||| ||||| | || |||||||| ||||| || || || || ||||||||||
Sbjct 24196 TGCAGGTCTGAATGTCCTGCGCATTATTAACGAACCTACGGCGGCTGCCATTGCTTATGG 24255
Query 474865 TCTTGATAAGAA 474876
|| ||||||||
Sbjct 24256 CCTGGATAAGAA 24267
>seq12
Length=470578
Score = 118 bits (130), Expect = 7e-21
Identities = 162/221 (73%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCT-AGAG 480609
||||||||| || ||||| || | || |||||||| || ||| ||||| ||| ||||
Sbjct 224334 ACGAAGACGCAGCACAAGGTGCAAAGTGCTTTCTTTCTGAATATTGTAATC-GCTCAGAG 224276
Query 480610 TTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTC 480669
| | |||||| ||||| ||||| ||||| || || || ||||| || || ||||| |
Sbjct 224275 TACGTCCATCTTCCAGTTGTTTTCCGGCAAATATGAGGCGCTGTTGGTCGGGGGGAATGC 224216
Query 480670 CTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCA 480728
||||||||||||| || || || ||| ||||| ||||| | | | || || ||
Sbjct 224215 CTTCCTTGTCTTGTATTTTCGACTTCACATTGTCAATCGTATCCGAAGATTCAACTTCCA 224156
Query 480729 AGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| ||||| || || || || | |||||| ||||| |||||
Sbjct 224155 A-AGTAATCGTCTTTCCCGTCAAAGTCTTGACGAATATTTG 224116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268154406775544
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |