Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq69 183 4e-41
seq18 84.2 3e-11
>seq69
Length=174959
Score = 183 bits (202), Expect = 4e-41
Identities = 695/1082 (64%), Gaps = 28/1082 (3%)
Strand=Plus/Minus
Query 75524 GGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGG 75583
||| | ||||| |||||||| || |||||| ||| || ||||| || | || | | ||
Sbjct 173350 GGTGTCATTCCCATGCTTCGTGTCTTTAACAACACGGCCCGCTACGTCGACCAGG-GCGG 173292
Query 75584 CGTC-----GCAAGGGGTCCATCGCGGTCTACTTGGAACCA-TGGCATGCCGATATCATG 75637
| | || ||| | || | || | ||| |||| ||| |||||||| ||| || |
Sbjct 173291 CAACAAGCGGCCAGGTG-CCTTTGCCATATACCTGGAGCCAATGGCATGCTGATGTCTTT 173233
Query 75638 GAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTT 75697
||||| || || || || ||||| || | || |||| ||| | | || |||||
Sbjct 173232 GAGTTTCTGGATTTGCGCAAGAACCATGGCAAGGAGGAGGTTCGAGCTCGCGACCTCTTC 173173
Query 75698 TCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCT 75757
| | ||||||||||||| ||||| ||||||||||| || ||| | ||| | ||| |
Sbjct 173172 TTAGCCCTGTGGATTCCCGACCTGTTCATGAAGCGCGTGGAGAAAAACGGTGATTGGACG 173113
Query 75758 CTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCC 75817
|| | || || || | || ||||| ||||| || || || ||||| ||
Sbjct 173112 CTCATGTGCCCCAACGAATGTCCCGGTCTGGCCGACTGCTACGGCGATGAATTTGAGGCT 173053
Query 75818 CTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTT 75877
|| ||| |||||| || ||||| | | | ||| || | || | || | |
Sbjct 173052 CTGTACGAAAAGTACGAGCGCGAGGGCCGTGGCCGCAAGACGGTGCGGGCT-CAGAAGCT 172994
Query 75878 -TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGA 75936
||| | |||| || || ||||||||| || || | || | ||||| ||||||||
Sbjct 172993 GTGGTATTCTATCCTGGAAGTACAGACGGAAACGGGCAACCCGTTCATGCTGTACAAGGA 172934
Query 75937 TGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTG 75996
| ||| ||| ||||| || |||||||| |||| || || ||| || || |||||
Sbjct 172933 TCATTGCAACCGCAAGAGCAATCAAAAGAACCTGGGCACCATTCGGAGTTCGAACCTTTG 172874
Query 75997 CACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAAT 76056
||||||||| | |||||| | | ||||| ||||| |||||| |||| || |
Sbjct 172873 CACGGAAATCGTTGAGTACTCTGCACCTGATGAAGTTGCTGTCTGCAATCTGGCCTCGCT 172814
Query 76057 CGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGA 76116
||||| || | ||| | | || || | || | | || || || ||
Sbjct 172813 AGCCCTGCCTGCCTTCGTCGACTATGACCAGGGCTGCTACGACTTCCAGAAGCTCCACGA 172754
Query 76117 AATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGT 76176
| || || | || | || || || | |||| ||| || ||| || ||
Sbjct 172753 GGTGACGCAGGTCGTCGTCCGTAACCTCAATAGGATCATCGACGTCAACCATTACCCAGT 172694
Query 76177 TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCT 76236
||| || | ||| || ||||| ||| |||| |||||| | ||||| || || ||
Sbjct 172693 TGAAGAGGCCCAAAACAGCAACATGCGCCACCGACCGATTGGTGTTGGTGTCCAGGGCCT 172634
Query 76237 CGCGGATGTATTTATTTTGTGCCGCTACGCAT-----TTGATTCAGATGAAGCCAAGGAG 76291
|| |||| |||| || | || ||||| |||| || || ||| ||||
Sbjct 172633 GGCTGATGC-----TTTTCTGGCTCTCCGCATGCCGTTTGAGTCTCCGGAGGCCCGGGAG 172579
Query 76292 ATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTG 76351
| || || || || ||||| || ||||| | || || || ||
Sbjct 172578 CTAAACCAGAAAATATTCGAGACCATCTACCACGCCGCGTTGACTGCCTCAATGGAGCTG 172519
Query 76352 GCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTT 76411
|| | | |||| |||| | | ||| | || || || ||||| | || |||||
Sbjct 172518 GCAAAGAGCGAAGGGCCCTACTCGTCGTTTAAAGGATCGCCTGCGTCGGAGGGCGTGCTC 172459
Query 76412 CAGTTTGATATGTGGGAAGGTGAAACC----AAGCTCAACTACGACTGGGATGTTCTCAA 76467
||||||||||||| |||||||||| || |||| || || ||||| |||
Sbjct 172458 CAGTTTGATATGT-GGAAGGTGAAGCCTTCAGAGCT---CTGGGAGTGGGAAACGCTCCG 172403
Query 76468 GGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGC 76527
||| | ||||||||| | || | || |||||||| || |||| || ||||| || ||
Sbjct 172402 GGAGCAGATCAAGGAGTATGGCATACGCAACAGTCTGCTGGTGGCCCCTATGCCGACGGC 172343
Query 76528 CTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTA 76587
| ||| | |||||| | || || || || ||||| || || ||||| | ||||||||
Sbjct 172342 CAGCACGTCGCAAATCCTTGGCAACAACGAGTGCTTCGAGCCTTACACGTCCAACATCTA 172283
Query 76588 CC 76589
||
Sbjct 172282 CC 172281
>seq18
Length=371689
Score = 84.2 bits (92), Expect = 3e-11
Identities = 214/320 (67%), Gaps = 7/320 (2%)
Strand=Plus/Minus
Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335
|||||||||||||| || || || ||||||| || || || ||||| || || |||
Sbjct 185411 GGTGCCAAGATCCCGCGTGGTGCTATTCTCGCCGGACCTCCGGGCACGGGTAAAACACTC 185352
Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTG-CTCTGCCGCAAA 175394
|| ||| |||| || || || ||| ||| | || | ||| | | || | |
Sbjct 185351 CTAGCCAAGGCCACGGCTGGAGAGTCAGGAGTCGCCTT-TTTCAGCGTCAGTGGGTCCGA 185293
Query 175395 CTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGC 175454
||| ||||||||||||| ||||| ||| | || || ||||| | || | | |
Sbjct 185292 GTTTATGGAGATGTTTGTGGGTGTCGGTTCGTCCAGAGTACGCGACTTATTCGCAGAGGG 185233
Query 175455 CCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAG--CA- 175511
|| | ||| |||||||| ||||||| ||||||||||| || | |||||| ||
Sbjct 185232 TCGTAAGAATGCTCCATGTATAATCTTCATCGATGAGATTGACGCTATTGGCAAGTCCAG 185173
Query 175512 -ACGCAGCGCTGGTGGTATGCCAGCAAATGACGAGAGAGAACAAACAATTAATCAACTAC 175570
||| || | | ||| ||| || || || |||| ||| | |||||| | |
Sbjct 185172 GGTGCAAGGCCGAGGCTAT-ACAGGCAACGAGGAACGAGAGGCCACACTGAATCAAATCC 185114
Query 175571 TCACCGAGATGGATGGCTTT 175590
| |||| ||||||||||||
Sbjct 185113 TTGCCGAAATGGATGGCTTT 185094
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596565289784640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |