Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20yeast- like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq24 86.0 2e-11 >seq24 Length=328731 Score = 86.0 bits (94), Expect = 2e-11 Identities = 151/220 (69%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 133437 TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGA 133496 ||||||| ||| || || | ||||||||||| |||||||||||||| | Sbjct 173573 TTCCTTGCATTCGCAAAAAGGCCGACTGGGCTATACGCTGGATCCAGGACAAAAACTCAT 173632 Query 133497 GTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGT 133556 |||||| || | || || ||||| | || ||||| || || || |||||||| | Sbjct 173633 CGTTTGCTCAACGCTTGGTGGCCTTTGCCGCGGTCGAGGGTATCTTCTTTAGTGGTGCCT 173692 Query 133557 TCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACG 133616 | ||| || || ||||| || |||||||| | | ||||| || ||||| |||| Sbjct 173693 TTGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCTTGACCTTTTCCAACG 173752 Query 133617 AACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGC 133656 |||| ||||| | || || | | ||||| || ||||| Sbjct 173753 AACTCATTTCGCGAGATGAAGGTTTGCACACGGACTTTGC 173792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471806700270786