Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq69 158 1e-33
seq12 136 4e-27
seq70 95.1 1e-14
seq14 89.7 5e-13
>seq69
Length=174959
Score = 158 bits (174), Expect = 1e-33
Identities = 1049/1667 (63%), Gaps = 41/1667 (2%)
Strand=Plus/Plus
Query 138358 ATCTCCCACACGGTCTTGTATAGATCACGAATATGTCG-CGGTATTGTTGCA-ATATTTT 138415
|||||||| ||||||||||| || | | |||| ||| ||||| || || |
Sbjct 172100 ATCTCCCAGACGGTCTTGTAAAGTGCTTTGAC--GTCGGCGGGGATGTTGGGGATGTTCT 172157
Query 138416 GAATGCTCCCGTTGGCCGCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAACT 138475
| ||| |||||| |||||||||| || || |||| | || | | ||| |
Sbjct 172158 GTATGGACCCGTTTTCCGCAATGATTCGGTTCTTCATCGCGTCCGACCATAAGCCCAAGT 172217
Query 138476 TGATCAAGTCGTTTATCAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGAC 138535
|| || || || | ||| | ||| | ||||| || || || |||| ||| || |
Sbjct 172218 CGACCAGATCCTTGAGCAGCCAGGGGTTGACCACCTGGAACTCGCCCGCCAGTACGCGTC 172277
Query 138536 GAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCG 138595
| ||| |||||| ||| ||||||| || | |||||||| || || || || | ||
Sbjct 172278 GCTGGTAGATGTTGGACGTGTAAGGCTCGAAGCACTCGTTGTTGCCAAGGATTTGCGACG 172337
Query 138596 TGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTC 138655
|| | || |||||||| ||||||| ||| || |||| || | ||||||
Sbjct 172338 TGCTGGCCGTCGGCATAGGGGCCACCAGCAGACTGTTGCGTATGCCATACTCCTTGATCT 172397
Query 138656 GTTCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACT 138715
| ||| ||||| ||| ||||| | || ||| || ||||||||||| |||
Sbjct 172398 GCTCCCGGAGCGTTTCCCACTCCCAGAGCTCTGAAGGCTTCACCTTCCACATATCAAACT 172457
Query 138716 GTAACATTCCCAAACTTGCGGGACTGCCTTCGTACGAATCGTATACACCAAA-CTCTTGC 138774
| | || ||| || || |||| |||| ||| || |||||
Sbjct 172458 GGAGCACGCCCTCCGACGCAGGCGATCCTTTAAACGACGAGTAGGGCCCTTCGCTCTTT- 172516
Query 138775 GCCAACTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTG 138834
|||| ||| | || | ||| | | ||| || || ||| || | ||| ||
Sbjct 172517 GCCAGCTCCATTGAGGCAGTCAACGCGGCGTGGTAGATGGTCTCGAATATTTTCTGGTTT 172576
Query 138835 AGCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGC 138894
||| |||||||| | ||| ||||||||||||| | || || || |||||
Sbjct 172577 AGCTCCCGGGCCTCCGGAGACTCAAACGGCATGCGGAGAGCCAGAAAAGCATCAGCCAGG 172636
Query 138895 CCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTG-CGGCTTCGAT 138953
|| || || || || || | || || ||||||| || | | ||| | | |||| |
Sbjct 172637 CCCTGGACACCAACACCAATCGGTCGGTGGCGCATGTT-GCTGTTTTGGGCCTCTTCAAC 172695
Query 138954 AGGATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGTCGTATG 139013
|| |||| ||| || |||||||| | || | || || ||||| |||| ||| |
Sbjct 172696 TGGGTAATGGTTGACGTCGATGATCCTATTGAGGTTACGGACGACGACCTGCGTCACCT- 172754
Query 139014 CTTTAATCGT-TCAAAATCGTATGTGCCCCCGTTGTCGTCGACGACGTC-GACAAATTTG 139071
| | | | | | || ||||| |||| || | |||||||| | | | || |
Sbjct 172755 CGTGGAGCTTCTGGAAGTCGTAGCAGCCCTGGTCATAGTCGACGAAGGCAGGCAGGGCT- 172813
Query 139072 TTGACACAAATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACA 139131
| |||||| | ||||| || || ||||| || || | ||| || ||
Sbjct 172814 ---------AGCGAGGCCAGATTGCAGACAGCAACTTCATCAGGTGCAGAGTACTCAACG 172864
Query 139132 ATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGG 139191
||||| | || | || || | || || || | || | ||||||||| || |||
Sbjct 172865 ATTTCCGTGCAAAGGTTCGAACTCCGAATGGTGCCCAGGTTCTTTTGATTGCTCTTGCGG 172924
Query 139192 TTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATG 139251
|| ||| ||| ||||| ||||| |||| |||| |||||| ||| || | ||
Sbjct 172925 TTGCAATGATCCTTGTACAGCATGAACGGGTTGCCCGTTTCCGTCTGTACTTCCAGGATA 172984
Query 139252 AATTTGAACAAGTCCCTAGCTTGTA---TTTGACGCACGTAAAGTTCGTCGCGCTCGTAC 139308
| | ||| | | ||| | | | | || | | | | ||||||||||||
Sbjct 172985 GAATACCACAGCTTCTGAGCCCGCACCGTCTTGCGGCC---ACGGCCCTCGCGCTCGTAC 173041
Query 139309 TTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCA 139368
|||||||| || | || ||| || |||||| ||| | ||| || |||| | ||
Sbjct 173042 TTTTCGTACAGAGCCTCAAATTCATCGCCGTAGCAGTCGGCCAGACCGGGACATTCGTTG 173101
Query 139369 GGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATC 139428
|| |||||||||| ||| | ||||| || |||||| |||||||||| || ||||||
Sbjct 173102 GGGCACATGAGCGTCCAATCACCGTTTTTCTCCACGCGCTTCATGAACAGGTCGGGAATC 173161
Query 139429 CACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTC-CGAACCCATGTTACGT-TTCA 139486
|||| || || | | ||||| || || | || | | ||||| | | | ||
Sbjct 173162 CACAGGGCTAAGAAGAGGTCGCGAGC--TCGAACCTCCTCCTTGCCATGGTTCTTGCGCA 173219
Query 139487 TGTTAAGGAAATCAAAAACGTCAGCGTGCCA-TGGTTCCAGATAGATGGCCATTGCGCCT 139545
| || || ||||| || ||||| ||||| ||| ||||| || ||||| | || |||
Sbjct 173220 AATCCAGAAACTCAAAGACATCAGCATGCCATTGGCTCCAGGTATATGGCAAAGGCACCT 173279
Query 139546 TTCCG---TTTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATC 139602
||| ||||| || || ||||||| || | | || || || || || | |||
Sbjct 173280 GGCCGCTTGTTGCCGCCCTGGTCGACGTAGCGGGCCGTGTTGTTAAAGACACGAAGCATG 173339
Query 139603 GGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGG--ATGGGACTGTTGCGAGCTCGGA 139660
|| | |||| ||| || |||||||||| ||| ||| | | | ||| ||||
Sbjct 173340 GGAATGACACCGTTCGAGGTCCCGTTGGTGC--CGGCAATGCAAGAGCCGGTAGCACGGA 173397
Query 139661 CGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCA-ATCGCGT 139719
||| || |||| ||||| || ||| | | || || || | |||| || |
Sbjct 173398 TCCGATGCACGTTGAGCCCGATGCCACCGGCCATCTTAGAGATCATGGCGCACGTCTTG- 173456
Query 139720 AATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAA 139779
| || ||||| || || |||||||| |||| ||| || || ||||| || ||
Sbjct 173457 AGCGTGTCGTAAATGCCCTCGATGCTGTCATCCTTCATGTCAACGAGGAAGCACGAGGAC 173516
Query 139780 AGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGT 139839
||||| | |||||| || ||||| | || ||| || ||||| | |
Sbjct 173517 AGTTGGCACTGAGGCGTGCCAGCGTTGAACAGCGCCGGCGACGCATGGGTGAAGAGCTTG 173576
Query 139840 TTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACA 139899
| ||||| | | ||||||||||| | | | | |||| || ||||| ||
Sbjct 173577 CTGGACATGAGGTTGTACGTTTCGAGGACTCGGTCGATATTGTCGCCCCATATACCCACG 173636
Query 139900 GAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGA 139959
| || ||||| | ||| |||||| || || | | | ||| |||| || ||||
Sbjct 173637 GCAACGCGCATGATCATGTGTTGGGGGCGCTCAACGATCTTGCCGTCGAGCTTCAGCAGA 173696
Query 139960 TAACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006
||| ||| || |||||| ||||||| ||| |||||| || ||
Sbjct 173697 TAAGAACGCTCCAGAGTCTTGAAGCCAAAATACTGATAGTTAAAGTC 173743
>seq12
Length=470578
Score = 136 bits (150), Expect = 4e-27
Identities = 116/143 (81%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
|||||||| ||||| || || || ||||||||||||||||| |||||||||||||| |||
Sbjct 223741 AAGATCCAGGACAAGGAGGGTATTCCTCCCGATCAACAACGCTTGATCTTTGCCGGAAAA 223800
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907
||| |||||||| || | | |||| || || |||||||| ||||| || ||||||||
Sbjct 223801 CAGTTGGAGGATGGCAGGACCTTGTCCGACTACAACATTCAGAAGGAGTCTACACTACAT 223860
Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930
| || |||| |||||||| ||
Sbjct 223861 CTTGTCCTGCGCTTGCGCGGCGG 223883
>seq70
Length=137430
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| | ||||| || || || || || || || || || || || | |
Sbjct 82752 GATGCAGATCTTTGTCAAAACCCTCACAGGGAAGACAATCACTCTTGAGGTGGAGTCTTC 82811
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || ||||| || ||||| || || || || ||||| ||
Sbjct 82812 TGACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCA 82871
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| || | ||||||||||| || ||||| || ||| ||| | || || |||||
Sbjct 82872 GCAGCGCCTCATCTTTGCCGGAAAGCAGCTCGAAGATGGCCGAACCCTGAGCGACTATAA 82931
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932
||| || ||||| || || ||| | || |||| ||||||| ||||
Sbjct 82932 CATACAGAAGGAGAGCACTCTGCACCTCGTCCTGCGCCTGCGCGGTGGCG 82981
>seq14
Length=772799
Score = 89.7 bits (98), Expect = 5e-13
Identities = 127/176 (72%), Gaps = 2/176 (1%)
Strand=Plus/Minus
Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGA-AAC 24777
|| || ||||| || ||||| || || ||||| || || | | || || | || |||
Sbjct 70022 AAGACCCTAACGGGCAAAACCATCACCCTCGAGGTCGAGTCGTCGGAAACGATCGATAAC 69963
Query 24778 GGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTT 24837
|||| | || ||| || || || || | || ||||| ||||||||||| |||||||
Sbjct 69962 TTTAAATCCAA-GATTCAGGATAAGGAGGTTATTCCTCCGGATCAACAACGACTGATCTT 69904
Query 24838 TGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGG 24893
||||| || ||||| || ||| ||| | |||| ||||| ||||| |||||||
Sbjct 69903 CGCCGGCAAGCAGCTTGAAGATGGCCGAACCCTGTCCGATTACAACATCCAAAAGG 69848
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449894349489840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |