Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20yeast- like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq12 84.2 2e-11 >seq12 Length=470578 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| ||||| || || ||||| ||||| || || || | ||| || | | Sbjct 223885 ATGCAAATCTTTGTGAAGACATTAACTGGCAAGACGATCACTTTGGAAGTCGAATCGTCC 223944 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | || || ||| || ||||| || || | ||| |||||| Sbjct 223945 GACACCATCGATAATGTGAAGTCGAAAATCCAGGACAAGGAGGGTATTCCCCCTGATCAA 224004 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | || || | ||| || || ||||| ||||||| | |||| || | ||||||||| Sbjct 224005 CAGCGCCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGAACTCTGTCCGATTACAAC 224064 Query 110453 ATTCAAAAAGAATCTACGTTGCAC 110476 || || ||||| || ||||||||| Sbjct 224065 ATCCAGAAAGAGTCCACGTTGCAC 224088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412838691788954