Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq69 152 8e-31
seq23 114 2e-19
seq40 100 5e-15
seq11 100 5e-15
seq24 98.7 2e-14
seq20 93.3 7e-13
>seq69
Length=174959
Score = 152 bits (168), Expect = 8e-31
Identities = 342/511 (67%), Gaps = 21/511 (4%)
Strand=Plus/Plus
Query 2073537 GCACTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTT 2073596
|| ||||||||| ||||| ||||||| ||||||||| || |||||||| | | |||||
Sbjct 173294 GCCCTGGTCGACGTAGCGGGCCGTGTTGTTAAAGACACGAAGCATGGGAATGACACCGTT 173353
Query 2073597 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAA 2073656
|| ||||||||||| || | | | | ||| | || || | | ||| || |
Sbjct 173354 CGAGGTCCCGTTGGTGCCGGCAATGCAAGAGCCGGTAGCACGGATCCGATGCACGTTGAG 173413
Query 2073657 GCCGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCC 2073716
|||||||| |||||| ||| ||||| | |||||| | || ||||| ||||| |||||
Sbjct 173414 CCCGATGCCACCGGCCATCTTAGAGATCATGGCGCACGTCTTGAGCGTGTCGTAAATGCC 173473
Query 2073717 CTCGATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGT 2073776
|||||| ||| |||||||||| | || |||||||| || ||| | | |||
Sbjct 173474 CTCGATGCTGTCATCCTTCATGTCAACGAGGAAGCACGAGGACAGTTGGCACTGAGGCGT 173533
Query 2073777 GCCGGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTA 2073836
||| || ||||| |||| |||| ||| ||| | || ||||||| | |||
Sbjct 173534 GCCAGCGTTGAACAGCGCCGGCGACGCATGGGTGAAGAGCTTGCTGGACATGAGGTTGTA 173593
Query 2073837 GGTGGCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGGCCGATGGC 2073896
|| |||| || || | | | || |||| |||||| || | |||
Sbjct 173594 CGTTTCGAGGACTCGGTCGA-----TATT----GTCG----CCCCATA--TACCCACGGC 173638
Query 2073897 GACGCGCATGATCATGTACTGGGGTCGCTCGACGA---CGGCGTCGCGCACCTTGGTCAG 2073953
|||||||||||||||| ||||| ||||| |||| | ||||| | ||| |||
Sbjct 173639 AACGCGCATGATCATGTGTTGGGGGCGCTCAACGATCTTGCCGTCG---AGCTTCAGCAG 173695
Query 2073954 GTAGGACCGACGCAGGGTCGCCAGGCCAAAGTACGAGTAGGCCAGGTCGCGCTCGTGGCG 2074013
|| || || ||| ||| | |||||| ||| ||| | ||| || || | |
Sbjct 173696 ATAAGAACGCTCCAGAGTCTTGAAGCCAAAATACTGATAGTTAAAGTCCCGGTCATAGAT 173755
Query 2074014 GATGGCGGCGTCGAGGGCCTCCTTGTGCGCC 2074044
|||||| | ||||| ||||||||||||
Sbjct 173756 GATGGCCGAATCGAGCCTATCCTTGTGCGCC 173786
Score = 107 bits (118), Expect = 3e-17
Identities = 172/246 (70%), Gaps = 1/246 (0%)
Strand=Plus/Plus
Query 2071768 AGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCTCGGACGGGCAAAAG 2071827
|| || ||||| | |||||| ||| ||| ||| ||||| ||| ||||| | |
Sbjct 173051 AGAGCCTCAAATTCATCGCCGTAGCAGTCGGCCAGACCGGGACATTCGTTGGGGCACATG 173110
Query 2071828 AGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCACGTCCACAGGCCG 2071887
|||| ||| || ||| || ||||||| ||| ||||||||| |||||||| |
Sbjct 173111 AGCGTCCAATCACCGTTTTTCTCCACGCGCTTCATGAACAGGTCGGGAATCCACAGGGCT 173170
Query 2071888 TAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGGTCGAGCCAG 2071947
| ||||| ||||| || || |||||||||||| |||||||| || || || |
Sbjct 173171 AAGAAGAGGTCGCGAGCTCGAACCTCCTCCTTGCCATGGTTCTTGCGCAAATCCAGAAAC 173230
Query 2071948 TCGACGAGGTCGGCGTGCCA-CGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTTGCC 2072006
|| | || || || ||||| ||||||||||| ||||||||| || ||||||
Sbjct 173231 TCAAAGACATCAGCATGCCATTGGCTCCAGGTATATGGCAAAGGCACCTGGCCGCTTGTT 173290
Query 2072007 GCCGCC 2072012
||||||
Sbjct 173291 GCCGCC 173296
>seq23
Length=335438
Score = 114 bits (126), Expect = 2e-19
Identities = 173/246 (70%), Gaps = 0/246 (0%)
Strand=Plus/Plus
Query 2019195 CTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCG 2019254
|||||||| ||| | |||||| | |||| || ||||||||||| || | || || |
Sbjct 189742 CTGCCGCCTGGCAGACACAAGCTCGTCATTCTGGATGAGGCCGATAGCATGACCTCAGGC 189801
Query 2019255 GCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTG 2019314
|| ||||||||||||||| |||||||| | ||| | |||||||| | || || |
Sbjct 189802 GCGCAGCAGGCCCTCCGACGCACCATGGAGATTTACTCAAACACGACAAGATTCGCCTTT 189861
Query 2019315 GCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGC 2019374
|||||||| ||| | | |||||||| | |||||| || || |||||| | ||
Sbjct 189862 GCCTGCAATCAGTCCAACAAGATCATCGAACCACTCCAGTCTCGATGTGCCATCCTCCGA 189921
Query 2019375 TTTGCGCGCCTCACCGACGCCCAGATCGCCGCGCGTCTGCGCGAGATTATCGACGCCGAA 2019434
| || |||||||| ||||| ||| | ||| || | | || || || || |||
Sbjct 189922 TACGCCAAGCTCACCGATACCCAGGTCGTCAAGCGGCTACTACAAATCATTGAGGCGGAA 189981
Query 2019435 AAGGTC 2019440
||||||
Sbjct 189982 AAGGTC 189987
>seq40
Length=231345
Score = 100 bits (110), Expect = 5e-15
Identities = 85/105 (81%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 2035651 CCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTA 2035710
||||||| || || |||||| || | || ||| | ||||||||||| ||||||||| | |
Sbjct 6306 CCAACTATCTTGATATCAAGTCCTTACTTGATGTTGGGTGCAAGACTGTGGCCAACATGA 6247
Query 2035711 TCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755
||||||| ||||| || ||||| || || ||||| || |||||||
Sbjct 6246 TCAAGGGAAAGTCTCCGGAGGAGATTCGGAAGACGTTCAACATCA 6202
>seq11
Length=470063
Score = 100 bits (110), Expect = 5e-15
Identities = 182/265 (69%), Gaps = 10/265 (4%)
Strand=Plus/Minus
Query 434136 TTTGACGGCACCTACGTCAACGACCGCCACTTTGCGCTGGCCACCGACACCATGTGCTGT 434195
||||||||| | ||||||||| | || ||| ||||||| || ||| |||| ||
Sbjct 340383 TTTGACGGCTCATACGTCAACCATCGGCACATTGCGCTACTGACGGACGTCATGACCTAC 340324
Query 434196 CGCGGCTCGGTGGTGGCCGTCACGCGGCACGGCTTCAACCGGGCCGACCACGGCTTTCTG 434255
||||| | | |||||| ||||||||||| | |||||||||||| ||| ||
Sbjct 340323 CGCGGTACCATCTCGGCCGTGACGCGGCACGGAATTAACCGGGCCGACACGGGCGCGCTC 340264
Query 434256 TCGCGGGCCTCCTTTGAGGAGACTGTCGACATCCTCTTTGACGCGGCGGCCTTTGCCGAG 434315
||| ||| || || ||||| ||||| |||||| | || || |||||| || ||||
Sbjct 340263 ATGCGCTGCTCATTCGAAGAGACGGTCGAGATCCTCCTCGAGGCTGCGGCCACTGGCGAG 340204
Query 434316 ACCGACAAGATCACCGACGGA--TCGGTCACCGAGCCCATCATTCTAGGCCAGGCGGCGC 434373
||| ||| ||| ||| |||| | || |||| || || ||| |||||
Sbjct 340203 CTGGAC--GATTGCCGCGGGATTTCGGAAAACG------TCATGCTGGGACAGATGGCGC 340152
Query 434374 CCATCGGCACGGCCATCTCGGACGT 434398
|||| || |||| || || |||||
Sbjct 340151 CCATGGGGACGGGCAACTTCGACGT 340127
Score = 87.8 bits (96), Expect = 3e-11
Identities = 154/222 (69%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 431030 CCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGATGTTTCTGCA 431089
||| |||||||| |||||||| |||||||||| | || |||| | || | ||
Sbjct 342091 CCGAGGCTTTGTCGAGAACTCGTATCTCCGCGGCCTCACCCCGTCCGAGTTTTTCTTCCA 342032
Query 431090 CATGATCGGCGGGCGCGAGGGTCTCGTCGACACGGCCGTCAAGACGGCCGAGACGGGCTA 431149
| || | || | ||||| ||| ||||||| |||||||||||||| || ||||| ||
Sbjct 342031 CGCCATGGCTGGTAGAGAGGGCCTCATCGACACAGCCGTCAAGACGGCAGAAACGGGATA 341972
Query 431150 CATCCAGCGTCGGTGCATCAAATCGATGGAGAGCCTGCAGATCAAGC-GCGGCGGCCTCG 431208
||||||| | ||| |||| || | || || | ||| | || || ||| |
Sbjct 341971 CATCCAGAGGCGGCTTGTCAAGGCGCTCGA-AGACCTCAGTGCGCGCTACGACGGAACTG 341913
Query 431209 TGCGCAACGCCAACGGCGACATTGTCCAGTTTGCCTATGGCG 431250
|||| ||| | ||||||||||||||||| ||| ||||
Sbjct 341912 TGCGGAACTCTTTGGGCGACATTGTCCAGTTCCTCTACGGCG 341871
Score = 87.8 bits (96), Expect = 3e-11
Identities = 137/196 (70%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 429518 CGGGTGGACCGTCGAGCGCCACCTGCGCACCGGCGACCCCGTGGTCATGAACCGGCAGCC 429577
|||||||| ||||| |||||| || ||| || | || | ||||| || ||
Sbjct 343192 CGGGTGGAAAGTCGAACGCCACTTGATGGACGGTGATTATATTGTATTCAACCGCCAACC 343133
Query 429578 GTCGCTCCACATGGGGTCGATGCTCAACCACAAGGTGGTGCCCATGCCCGGTCGCACCTT 429637
|||||| |||| || ||| ||| | || || |||||| | ||| ||
Sbjct 343132 GTCGCTTCACAAGGAGTCCATGATGGGACATTGCGTCCGCGTCATGCCTTATTCCACTTT 343073
Query 429638 CCGGCTCAACCTGGCCGTGACGGGCACCTACAACGCCGACTTTGACGGCGACGAGATGAA 429697
||| |||||||| | || || |||||||||| || ||||||||||||||||||||
Sbjct 343072 CCGTCTCAACCTCTCTGTCACCTCGCCCTACAACGCGGATTTTGACGGCGACGAGATGAA 343013
Query 429698 CCTGCACGTGCCCCAG 429713
| ||||||||||||||
Sbjct 343012 CTTGCACGTGCCCCAG 342997
>seq24
Length=328731
Score = 98.7 bits (108), Expect = 2e-14
Identities = 174/252 (69%), Gaps = 4/252 (2%)
Strand=Plus/Minus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| ||| || || || ||| |||||||||||||| |||||| | |
Sbjct 174097 TGACACCGGCCTTCTGATAGTCACCAACCCGCTTTTCGAAAAAGTTGGTTTTGCCCCCTA 174038
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
|||| || ||||| | || || || | || | ||| ||| ||| || |
Sbjct 174037 GCGATATGTTTTCCATGAAATCAAAGGGATTTGACGACCTGTACATCTTTTCGTTGCCCA 173978
Query 794011 G--CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTT 794068
| ||||| || ||||||||||| ||||| || || ||||| ||| | || |||||
Sbjct 173977 GTGCGACG--AGAAGGCGGTCGGCAACGAACTCGATATACTGCTTCATCAAGGTAGCGTT 173920
Query 794069 CATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGC 794128
|||||| | | || |||||| | ||| | | ||| |||| ||||| |||||||
Sbjct 173919 CATGCCAAGTAATGCGCAGGGCAGGGCTTCGGTTAGAAATTCTTGTTCGATGGCGACGGC 173860
Query 794129 CTCGATGATGAT 794140
||| |||||||
Sbjct 173859 ATCGGTGATGAT 173848
>seq20
Length=364491
Score = 93.3 bits (102), Expect = 7e-13
Identities = 97/122 (80%), Gaps = 4/122 (3%)
Strand=Plus/Plus
Query 2233091 GTCGCCTTTCCCACCGAGACCGTCTATGGCCTCGGCGCCGACGCGGCG-TCAGACGAGGC 2233149
|| ||||||||||||||||| || || || || || ||||||||| || ||| ||| ||
Sbjct 201075 GTGGCCTTTCCCACCGAGACGGTGTACGGGCTTGGGGCCGACGCGACGCGCAG-CGATGC 201133
Query 2233150 CGTACAGCG-CATCTTTGACGCCAAGGGCCGACCGTCCAACAACCCGATCATCGTGCACG 2233208
||| | ||| ||| | | ||| |||||| || ||| | |||||||| ||||||||||||
Sbjct 201134 CGTGC-GCGCCATATATCACGTCAAGGGTCGGCCGACGGACAACCCGCTCATCGTGCACG 201192
Query 2233209 TG 2233210
||
Sbjct 201193 TG 201194
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916184915503742
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