Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20yeast- like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq12 165 2e-35 >seq12 Length=470578 Score = 165 bits (182), Expect = 2e-35 Identities = 166/216 (77%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 |||||| || | ||||| ||| ||||||||| ||||| ||||| ||| | | || Sbjct 224328 ACGCAGCACAAGGTGCAAAGTGCTTTCTTTCTGAATATTGTAATCGCTCAGAGTACGTCC 224269 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 ||||| ||||||||||| ||||| || || | ||||| || || || || |||||||| Sbjct 224268 ATCTTCCAGTTGTTTTCCGGCAAATATGAGGCGCTGTTGGTCGGGGGGAATGCCTTCCTT 224209 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 ||||| || || | || ||||| ||||||||||| || ||| ||||||||||| || Sbjct 224208 GTCTTGTATTTTCGACTTCACATTGTCAATCGTATCCGAAGATTCAACTTCCAAAGTAAT 224149 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||| || ||||| ||||| || ||||| ||||| Sbjct 224148 CGTCTTTCCCGTCAAAGTCTTGACGAATATTTGCAT 224113 Score = 147 bits (162), Expect = 4e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | |||||| || || | ||||| || || |||||||| || || ||||| | Sbjct 224113 TACCGCCGCGCAAACGAAGGACAAGGTGCAACGTGGACTCTTTCTGGATGTTGTAATCGG 224054 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| ||| || || || || || || ||||||||||| || | |||||||| || | Sbjct 224053 ACAGAGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGATCAGGGG 223994 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||| || || || || | || ||||| || || || || | ||| | Sbjct 223993 GAATACCCTCCTTGTCCTGGATTTTCGACTTCACATTATCGATGGTGTCGGACGATTCGA 223934 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||||| ||||||||||| || || ||||| ||||| || ||||| Sbjct 223933 CTTCCAAAGTGATCGTCTTGCCAGTTAATGTCTTCACAAAGATTTGCAT 223885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981819928955942