Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq69 297 2e-75
seq24 127 2e-24
seq70 98.7 1e-15
>seq69
Length=174959
Score = 297 bits (328), Expect = 2e-75
Identities = 1141/1748 (65%), Gaps = 82/1748 (5%)
Strand=Plus/Plus
Query 148052 CGACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA---GTCGCTT 148108
||||||| |||||| || || || || ||||| || ||||| | | | ||||||
Sbjct 172036 CGACTGGGACTGGTCGATAAAAGCACCCCGGTCGGCCGCCATCTGCACCACCTGTCGCTG 172095
Query 148109 TATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGAT 148168
| ||||||||| | |||||||| || |||| | |||| ||| | |||
Sbjct 172096 ---CGAAATCTCCCAGACGGTCTTGTAAAGTGCTTTGACGTCGGCGGGGATGTTGGGGAT 172152
Query 148169 GCGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTT 148228
| ||| | || ||| | ||||| || | || ||| |||||| ||| |
Sbjct 172153 GTTCTGTATGGACCCGTTTTCCGCAATGATTCGGTTCTTCATCGCGTCCGACCATAAGCC 172212
Query 148229 GAGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCAC 148288
| |||| ||| || | || ||| | | || |||||||| |||||||| || || ||
Sbjct 172213 CAAGTCGACCAGATCCTTGAGCAGCCAGGGGTTGACCACCTGGAACTCGCCCGCCAGTAC 172272
Query 148289 GCGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTG 148348
||| ||| | || | |||| ||| | || || || ||||||||||||| | || ||
Sbjct 172273 GCGTCGCTGGTAGATGTTGGACGTGTAAGGCTCGAAGCACTCGTTGTTGCCAAGGATTTG 172332
Query 148349 CGCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTT 148408
|| || | ||||| ||||| || |||||||| |||||| | || | ||
Sbjct 172333 CGACGTGCTGGCCGTCGGCATAGGGGCCACCAGCAGACTGTTGCGTATGCCATACTCCTT 172392
Query 148409 TATTTTGCGCTTCAGAGCCG--CCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATG 148466
|| | || | | |||| |||| ||||||||| || || |||| ||||||||
Sbjct 172393 GATCT-GCTCC-CGGAGCGTTTCCCACTCCCAGAGCTCTGAAGGCTTCACCTTCCACATA 172450
Query 148467 TCGTACTGCAGAATGCCGCGGCTA-GCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTG 148525
|| |||| || | ||| | | | || || || | |||| ||| || || |
Sbjct 172451 TCAAACTGGAGCACGCC-CTCCGACGCAGGCGATCCTTTAAACGACGAGTAGGGCCCTT- 172508
Query 148526 CGC-CGCCGCCAGTTCGCAGCTCGCC--TCGAGCGCGCCGTAGTAAATCGTCTCGGCAAT 148582
||| | ||||| || || | | || | |||| ||| ||| || |||||| ||
Sbjct 172509 CGCTCTTTGCCAGCTC-CATTGAGGCAGTCAA-CGCGGCGTGGTAGATGGTCTCGAATAT 172566
Query 148583 TTGCCTGTTGAGCAGC---GCCGCCG-ACTCGCTTTCGTACGGCATACGCAGCCGCACAA 148638
|| | ||| ||| | ||| ||| | | || ||||||| || || || ||
Sbjct 172567 TTTCTGGTTTAGCTCCCGGGCCTCCGGAGAC----TCAAACGGCATGCGGAGAGCCAGAA 172622
Query 148639 ACGCGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGC 148698
| || || || |||||||| || || || ||||| || ||||| |||||| |
Sbjct 172623 AAGCATCAGCCAGGCCCTGGACACCAACACCAATCGGTCGGTGGCGCATGTTGCTGTTTT 172682
Query 148699 GCGCGCTCTCGAGC-GGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACC 148757
| || |||| | | || || |||||| |||||||||| | | || || || || ||
Sbjct 172683 GGGC-CTCTTCAACTGGGTAATGGTTGACGTCGATGATCCTATTGAGGTTACGGACGACG 172741
Query 148758 ACCTTTGTAATTCTGCGCAGCAATTCAAAATCGTA------CTTGTCAT---CTACGATG 148808
|||| || | | | ||| | || ||||| || ||||| | |||| |
Sbjct 172742 ACCTGCGTCACCTCGTGGAGCTTCTGGAAGTCGTAGCAGCCCTGGTCATAGTCGACGAAG 172801
Query 148809 -CATCGGTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTA 148867
|| || || ||| | ||||| |||||||| || || ||||| || || |||
Sbjct 172802 GCA--GG--CAGGGCTAGCGAGGCCAGATTGCAGACAGCAACTTCATCAGGTGCAGAGTA 172857
Query 148868 CTCTACGATCTCGGCGCACAGATTG---CTGCATTTGATCACGCCCACGTTCTTTTGATT 148924
||| ||||| || | ||| || || || | || | ||||| ||||||||||||
Sbjct 172858 CTCAACGATTTCCGTGCAAAGGTTCGAACTCCGAATGGT---GCCCAGGTTCTTTTGATT 172914
Query 148925 GCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGT 148984
|||||||| |||||| ||||||||||||||| |||| ||| |||||| |||
Sbjct 172915 GCTCTTGCGGTTGCAATGATCCTTGTACAGCATGAACGGGTTGCCCGTTTCCGTCTGTAC 172974
Query 148985 TTCCACTAT-GAAC-CGATGCAGGTCCTGCGCGCGCAC----TTGCTGCTCGTAGCGACC 149038
||||| || ||| | | ||| | ||| || ||||| |||| || || ||
Sbjct 172975 TTCCAGGATAGAATACCA--CAGCTTCTGAGCCCGCACCGTCTTGCGGCCA----CGGCC 173028
Query 149039 CTCCTGCTCGTA--TAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGA 149096
||| ||||||| | ||| | |||| || || | ||||||||||| ||| | |||
Sbjct 173029 CTCGCGCTCGTACTTTTCGTACAGAGCC--TCAAATTCATCGCCGTAGCAGTCGGCCAGA 173086
Query 149097 CCGGGGCACTTGTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATA 149156
||||| || | || ||||||||||||| ||| | |||| | ||||||||||||
Sbjct 173087 CCGGGACATTCGTTGGGGCACATGAGCGTCCAATCACCGTTTTTCTCCACGCGCTTCATG 173146
Query 149157 AACAGATCGGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCA-GTCTTCGGCGCC 149215
||||| ||||| | ||| || || | | ||||||||| | || | | || || |||
Sbjct 173147 AACAGGTCGGGAATCCACAGGGCTAAGAAGAGGTCGCGAG-CTCGAACCTCCTCCTTGCC 173205
Query 149216 CATGTTGCGGCGCAGGTTGAGCACGCTGAATATGTCCGCGTGCCA-CGGCTCAATGTACA 149274
||| ||||| | || | || | || || ||||| ||||| | ||| |
Sbjct 173206 ATGGTTCTTGCGCAAATCCAGAAACTCAAAGACATCAGCATGCCATTGGCTCCAGGTATA 173265
Query 149275 CCGCGAGCGCGCCCTTGCGC---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAA 149331
|| | || || ||| ||||||||||||||||||| ||| || |||||||||
Sbjct 173266 TGGCAAAGGCACCTGGCCGCTTGTTGCCGCCCTGGTCGACGTAGCGGGCCGTGTTGTTAA 173325
Query 149332 ACACTCGAACCATAGGTTCAATGCCAC---TGGCAGTGCCGTTAGTAGAGCTAATGCGAC 149388
| || |||| ||| || |||| ||| | | || ||||| || | ||||| |
Sbjct 173326 AGACACGAAGCATGGG---AATGACACCGTTCGAGGTCCCGTTGGTGCCGGCAATGCAAG 173382
Query 149389 TGCCGCGCGCTCGCACTTTGTGCACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGG 149448
|||| || || | |||||||||| |||||||| ||| | ||| |||||
Sbjct 173383 AGCCGGTAGCACGGATCCGATGCACGTTGAGCCCGATGCCACCGGCCATCTTAGAGATCA 173442
Query 149449 CCGCGCA-GTCGCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGC 149507
||||| ||| |||||| ||| ||||||||||||||||| |||||| |||| |
Sbjct 173443 TGGCGCACGTC-TTGAGCGTGTCGTAAATGCCCTCGATGCTGTCATCCTTCAT-GTCAAC 173500
Query 149508 -AGAAAGCACGAGCACATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGC 149566
|| ||||||||| ||| ||| | ||||||| || ||||| | || ||
Sbjct 173501 GAGGAAGCACGAGGACAGTTGGCACTGAGGCGTGCCAGCGTTGAACAGCGCCGGCGACGC 173560
Query 149567 GTGTGT-AAAATATTTCTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCAT 149625
|| || || | || |||| ||| | | ||||| ||||| || ||||| || | |
Sbjct 173561 ATGGGTGAAGAGCTTGCTGG-ACATGAGGTTGTACGTTTCGAGGACTCGGTCGATATTGT 173619
Query 149626 CGCCATGGATGCCTATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGT 149685
|||| || || | ||| |||||||| | ||| || || || ||||| | | |||
Sbjct 173620 CGCCCCATATACCCACGGCAACGCGCATGATCATGTGTTGGGGGCGCTCAACGATCTTGC 173679
Query 149686 TTCCAATTTTGAGCAAGTAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAA 149745
| | || |||| || || || |||||| ||||||| |||| |||| ||
Sbjct 173680 CGTCGAGCTTCAGCAGATAAGAACGCTCCAGAGTCTTGAAGCCAAAATACTGATAGTTAA 173739
Query 149746 AGTCGCGG 149753
|||| |||
Sbjct 173740 AGTCCCGG 173747
>seq24
Length=328731
Score = 127 bits (140), Expect = 2e-24
Identities = 342/520 (66%), Gaps = 25/520 (5%)
Strand=Plus/Minus
Query 120355 TACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCATA 120414
|| || || || || || || |||||||| ||||||||| | | ||| ||||| | |||
Sbjct 174080 TAGTCACCAACCCGCTTTTCGAAAAAGTTGGTTTTGCCCCCTAGCGATATGTTTTCCATG 174021
Query 120415 AACTCGAACGGGTTGCTCG--CGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAGTC 120472
|| || || || || || | || | ||||| | ||||| ||||| || |
Sbjct 174020 AAATCAAAGGGATTTGACGACCTGTACATCTTTTCG--TTGCCCAGTGCGACGAGAAGGC 173963
Query 120473 GGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCA 120532
|||| || || ||||| || |||| ||| | ||||||||||| || || ||
Sbjct 173962 GGTCGGCAACGAACTCGATATACTGCTTCATCAAGGTAGCGTTCATGCCAAGTAATGCGC 173903
Query 120533 CCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGCGA 120592
|||| || || | ||| || | || ||| | || || || ||| ||| |
Sbjct 173902 AGGGCAGGGCTTCGGTTAGAAATTCTTGTTCGATGGCGACGGCATCGGTGATGATGTC-- 173845
Query 120593 GCATAG------TGTGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGG---C 120643
|||| ||| | ||| | || || || | ||| ||| |||| |
Sbjct 173844 --ATAGATGACCTGTTTGCTGGC--CCGGTTTTTGAGGTGCG------AGTGCAGGAGAC 173795
Query 120644 ACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGC 120703
| |||||||||||||||| || || || ||||| || || |||||| ||| |||| ||
Sbjct 173794 ATGCAAAGTCCGTGTGCAAACCTTCATCTCGCGAAATGAGTTCGTTGGAAAAGGTCAAGC 173735
Query 120704 CGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACA 120763
| ||||||| ||| | |||||| |||| |||| ||||||| || |||||| |
Sbjct 173734 CAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCACTAAAGAAGA 173675
Query 120764 CGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGA 120823
||||| || ||||||||| |||| ||| | || |||| | | ||| | ||
Sbjct 173674 TACCCTCGACCGCGGCAAAGGCCACCAAGCGTTGAGCAAACGATGAGTTTTTGTCCTGGA 173615
Query 120824 TCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGG 120863
|||| || ||||| |||||||||||||| | ||| ||
Sbjct 173614 TCCAGCGTATAGCCCAGTCGGCCTTTTTGCGAATGCAAGG 173575
>seq70
Length=137430
Score = 98.7 bits (108), Expect = 1e-15
Identities = 139/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527
||| |||||||| || || |||| || || | | | || ||||||||||| || ||
Sbjct 82944 CTCCTTCTGTATGTTATAGTCGCTCAGGGTTCGGCCA-TCTTCGAGCTGCTTTCCGGCAA 82886
Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587
| ||||| |||||||||||||| || ||||| |||||||| ||||| ||||| |
Sbjct 82885 AGATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGT 82826
Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647
|| | ||||| | | |||||| || | |||| || || || || || ||||| |
Sbjct 82825 TGTCGATGGTGTCAGAAGACTCCACCTCAAGAGTGATTGTCTTCCCTGTGAGGGTTTTGA 82766
Query 133648 CGAAAATCTGCAT 133660
| || ||||||||
Sbjct 82765 CAAAGATCTGCAT 82753
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483417307284720
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