Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq12 105 4e-18
seq70 91.5 1e-13
>seq12
Length=470578
Score = 105 bits (116), Expect = 4e-18
Identities = 163/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||| || | |||||| | || | || | ||| |||||| || ||||||||||||||
Sbjct 224112 ACCGCCGCGCAAACGAAGGACAAGGTGCAACGTGGACTCTTTCTGGATGTTGTAATCGGA 224053
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || || | || || | || || || ||||| |||| ||||| ||||| | ||
Sbjct 224052 CAGAGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGATCAGGGGG 223993
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||| || ||||| |||||| ||| |||| || | ||||||| ||||| |
Sbjct 223992 AATACCCTCCTTGTCCTGGATTTTCGACTTC-ACATTATCGATGGTGTCGGACGATTCGA 223934
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | |||||||| || || ||||| || || |||||||| ||||||
Sbjct 223933 CTTCCAAAGTGATCGTCTTGCCAGTTAATGTCTTCACAAAGATTTGCATA 223884
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | | ||| | ||| | || | |||||| ||||| || || |||||||||
Sbjct 224339 CCACCACGAAGACGCAGCACAAGGTGCAAAGTGCTTTCTTTCTGAATATTGTAATCGCTC 224280
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| || ||| | || |||| ||||||||||||||| || | ||||| || || | ||
Sbjct 224279 AGAGTACGTCCATCTTCCAGTTGTTTTCCGGCAAATATGAGGCGCTGTTGGTCGGGGGGA 224220
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| ||||| ||||| |||||| ||| |||| ||| | || || ||||| ||
Sbjct 224219 ATGCCTTCCTTGTCTTGTATTTTCGACTTC-ACATTGTCAATCGTATCCGAAGATTCAAC 224161
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|| | || ||||| || || || || || || || || || ||||||
Sbjct 224160 TTCCAAAGTAATCGTCTTTCCCGTCAAAGTCTTGACGAATATTTGCATA 224112
>seq70
Length=137430
Score = 91.5 bits (100), Expect = 1e-13
Identities = 144/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606
|| ||||||||||| || |||||||| || ||| || || || | || || | ||
Sbjct 82955 TGCAGAGTGCTCTCCTTCTGTATGTTATAGTCGCTCAGGGTTCGGCCATCTTCGAGCTGC 82896
Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666
||||||||||| || | |||||||| || | || | || || ||||| ||| ||
Sbjct 82895 TTTCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTT- 82837
Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725
| | || | ||| | |||||| || ||||| |||| ||||| || || |||||
Sbjct 82836 GGACTTGACGTTGTCGATGGTGTCAGAAGACTCCACCTCAAGAGTGATTGTCTTCCCTGT 82777
Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749
| ||||| ||||||||||||||
Sbjct 82776 GAGGGTTTTGACAAAGATCTGCAT 82753
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328701684485760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |