Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq70 105 2e-17
seq12 96.9 8e-15
>seq70
Length=137430
Score = 105 bits (116), Expect = 2e-17
Identities = 147/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| |||||| |||||||| || || |||||| | || ||||| |||||||
Sbjct 82756 CAGATCTTTGTCAAAACCCTCACAGGGAAGACAATCACTCTTGAGGTGGAGTCTTCTGAC 82815
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| |||||||| || || || || ||| || ||| ||
Sbjct 82816 ACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAG 82875
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||| |||||||||||| | |||||||| | || || ||| || ||| |
Sbjct 82876 CGCCTCATCTTTGCCGGAAAGCAGCTCGAAGATGGCCGAACCCTGAGCGACTATAACATA 82935
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||| ||||| ||||| ||
Sbjct 82936 CAGAAGGAGAGCACTCTGCACCTCGT 82961
>seq12
Length=470578
Score = 96.9 bits (106), Expect = 8e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
|| ||||| ||| || | || ||||| ||||| ||||||||||| ||| ||| ||
Sbjct 224116 CAAATATTCGTCAAGACTTTGACGGGAAAGACGATTACTTTGGAAGTTGAATCTTCGGAT 224175
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| || || ||||| || ||||| ||| || ||| ||
Sbjct 224176 ACGATTGACAATGTGAAGTCGAAAATACAAGACAAGGAAGGCATTCCCCCCGACCAACAG 224235
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || || || |||||||| || ||||||||||| | ||| || ||||||||| |
Sbjct 224236 CGCCTCATATTTGCCGGAAAACAACTGGAAGATGGACGTACTCTGAGCGATTACAATATT 224295
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390
|||||||| ||| | |||||||| || | |||||
Sbjct 224296 CAGAAAGAAAGCACTTTGCACCTTGTGCTGCGTCTTCG 224333
Score = 95.1 bits (104), Expect = 3e-14
Identities = 132/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || || ||||||||||||||||| ||| || ||||| |||| || |||
Sbjct 223909 ACTGGCAAGACGATCACTTTGGAAGTCGAATCGTCCGACACCATCGATAATGTGAAGTCG 223968
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
|| || || || || || || ||| || || || | || ||||| || || |||
Sbjct 223969 AAAATCCAGGACAAGGAGGGTATTCCCCCTGATCAACAGCGCCTGATCTTTGCTGGCAAG 224028
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
||| | || ||||| | ||| || ||||||||||| ||||||||||||| || | |||
Sbjct 224029 CAGCTTGAGGATGGCCGAACTCTGTCCGATTACAACATCCAGAAAGAGTCCACGTTGCAC 224088
Query 206374 CTTGT 206378
|||||
Sbjct 224089 CTTGT 224093
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181812047878338
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |