Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq12 118 1e-21
seq70 107 2e-18
seq14 87.8 2e-12
>seq12
Length=470578
Score = 118 bits (130), Expect = 1e-21
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 35534 TGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGC 35593
|| ||||| ||| || || ||||||||||||| || ||||| | || || ||||||
Sbjct 224087 TGCAACGTGGACTCTTTCTGGATGTTGTAATCGGACAGAGTTCGGCCATCCTCAAGCTGC 224028
Query 35594 TTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTT 35653
|| || ||||| |||| ||||| || || | |||| | |||||||||| ||| ||
Sbjct 224027 TTGCCAGCAAAGATCAGGCGCTGTTGATCAGGGGGAATACCCTCCTTGTCCTGGATTTTC 223968
Query 35654 TGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTC 35713
||||| | | | | |||||| |||||| || |||| |||||||| || || ||
Sbjct 223967 GACTTCACATTATCGATGGTGTCGGACGATTCGACTTCCAAAGTGATCGTCTTGCCAGTT 223908
Query 35714 AAAGTTTTCACAAATATCTGCAT 35736
|| || |||||||| || |||||
Sbjct 223907 AATGTCTTCACAAAGATTTGCAT 223885
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 35509 TCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGC 35568
||||||||| | | || ||| | || || || || || || ||||| |||||||||
Sbjct 224340 TCCACCACGAAGACGCAGCACAAGGTGCAAAGTGCTTTCTTTCTGAATATTGTAATCGCT 224281
Query 35569 CAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGG 35628
|| || || | || ||||| || || || |||||||| | ||||| ||||| | ||
Sbjct 224280 CAGAGTACGTCCATCTTCCAGTTGTTTTCCGGCAAATATGAGGCGCTGTTGGTCGGGGGG 224221
Query 35629 AACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688
|| || |||||||| || || ||||| | | | | ||| || ||||| ||
Sbjct 224220 AATGCCTTCCTTGTCTTGTATTTTCGACTTCACATTGTCAATCGTATCCGAAGATTCAAC 224161
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||| || ||||| || ||||||||||| || || ||||| |||||
Sbjct 224160 TTCCAAAGTAATCGTCTTTCCCGTCAAAGTCTTGACGAATATTTGCAT 224113
Score = 87.8 bits (96), Expect = 2e-12
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|| || || || | || || | ||||| ||| |||||| ||||||||||| |||| |
Sbjct 223883 CCGCCGCGCAAGCGCAGGACAAGATGTAGTGTAGACTCCTTCTGAATGTTGTAGTCGGAC 223824
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
||||| | | || |||| ||| || || ||||| ||||| || || || || | ||||
Sbjct 223823 AAGGTCCTGCCATCCTCCAACTGTTTTCCGGCAAAGATCAAGCGTTGTTGATCGGGAGGA 223764
Query 35630 ACGCTCTCCTTGTCCATGATCTT 35652
| | |||||||||| ||||||
Sbjct 223763 ATACCCTCCTTGTCCTGGATCTT 223741
>seq70
Length=137430
Score = 107 bits (118), Expect = 2e-18
Identities = 144/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599
|| |||||||| || ||||| || ||| || |||||| | || || |||||||| ||
Sbjct 82949 GTGCTCTCCTTCTGTATGTTATAGTCGCTCAGGGTTCGGCCATCTTCGAGCTGCTTTCCG 82890
Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659
||||| || | ||||||||||| | |||| || |||||||||| ||||| |||
Sbjct 82889 GCAAAGATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTG 82830
Query 35660 AGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGT 35718
| |||| | | ||||| || |||||||| | ||||| || || || || | ||
Sbjct 82829 A-CGTTGTCGATGGTGTCAGAAGACTCCACCTCAAGAGTGATTGTCTTCCCTGTGAGGGT 82771
Query 35719 TTTCACAAATATCTGCAT 35736
||| ||||| ||||||||
Sbjct 82770 TTTGACAAAGATCTGCAT 82753
>seq14
Length=772799
Score = 87.8 bits (96), Expect = 2e-12
Identities = 121/167 (72%), Gaps = 2/167 (1%)
Strand=Plus/Plus
Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606
||||||| ||||||||||||| || |||||| | || || |||||||| || || || |
Sbjct 69848 CCTTTTGGATGTTGTAATCGGACAGGGTTCGGCCATCTTCAAGCTGCTTGCCGGCGAAGA 69907
Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT- 35665
||| || || || |||| ||||| |||||| ||| ||| || | || | ||||
Sbjct 69908 TCAGTCGTTGTTGATCCGGAGGAATAACCTCCTTATCC-TGAATCTTGGATTTAAAGTTA 69966
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712
| | ||| || ||| || ||||| | ||||| ||||| |||||
Sbjct 69967 TCGATCGTTTCCGACGACTCGACCTCGAGGGTGATGGTTTTGCCCGT 70013
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450790343016240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |