Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20yeast- like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq69 113 5e-20 seq12 98.7 1e-15 >seq69 Length=174959 Score = 113 bits (124), Expect = 5e-20 Identities = 544/852 (64%), Gaps = 20/852 (2%) Strand=Plus/Minus Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623 ||||||||| | ||||||| || ||||| || ||||| | || ||| | | | Sbjct 173659 CAACACATGATCATGCGCGTTGCCGTGGGTATATGGGGCGACAATATCGACCGAGTCCTC 173600 Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCC 7683 ||||||||| | | ||||| || | || || || || ||||| | |||| | Sbjct 173599 GAAACGTACAACCTCATGTCCAGCAAGCTCTTCACCCATGCGTCGCCGGCGCTGTTCAAC 173540 Query 7684 GCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGC 7743 || ||||| | ||| |||||||||| || | | |||| || |||||| Sbjct 173539 GCTGGCACGCCTCAGTGCCAACTGTCCTCGTGCTTCCTCGTTGACATGAAGGATGACAGC 173480 Query 7744 ATCGACGGCATTTACAACACGCTGCGCGAT-TGCGCCAATATTTCCAAATACGGCGGCGG 7802 ||||| ||||||||| ||||||| | || ||||||| || || || | ||| || Sbjct 173479 ATCGAGGGCATTTACGACACGCT-CAAGACGTGCGCCATGATCTCTAAGATGGCCGGTGG 173421 Query 7803 AATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGG 7862 || || || ||||| | | || || | ||| |||| | ||||||||| Sbjct 173420 CATCGGGCTCAACGTGCATCGGATCCGTGCTACCGGCTCTTGCATTGCCGGCACCAACGG 173361 Query 7863 AAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGA 7922 | | | |||| | |||||| | || || || || ||| ||| || | || || Sbjct 173360 GACCTCGAACGGTGTCATTCCCATGCTTCGTGTCTTTAACAACACGGCCCGCTACGTCGA 173301 Query 7923 CCAGGGGGGAAA---GCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCG-TGGCACGCGG 7978 |||||| || || ||| ||| ||| |||||| || ||||||| ||||| || | Sbjct 173300 CCAGGGCGGCAACAAGCGGCCAGGTGCCTTTGCCATATACCTGGAGCCAATGGCATGCTG 173241 Query 7979 ACATTTACGCAGTGCTAAATCTGCGTCGCAAC-ATGGGTTGCGAAGACAGCAAAGCGCGC 8037 | | | | | || || |||| ||| |||| | || || ||| ||| Sbjct 173240 ATGTCTTTGAGTTTCTGGATTTGCGCAAGAACCATGGCAAG-GAGGAGGTTCGAGCTCGC 173182 Query 8038 GATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACGCA 8097 || || ||||| | ||||| | ||||| ||||| |||| |||||| | ||| Sbjct 173181 GACCTCTTCTTAGCCCTGTGGATTCCCGACCTGTTCATGAAGCGCGTGGAGAAAAACGGT 173122 Query 8098 CAATGGTCGCTCATGTGCCCCGATCGTTGCCCTTTATTAAAAAACGTTTACGGTTCAAAA 8157 | ||| |||||||||||||| | || || | || ||||| || Sbjct 173121 GATTGGACGCTCATGTGCCCCAACGAATGTCCCGGTCTGGCCGACTGCTACGGCGATGAA 173062 Query 8158 TTTGAACAATTGTACAAACAATACGAACACGACGGCGCGTACGTGCGGCAAGTGAAAGCG 8217 ||||| ||||| || | ||||| | ||| ||| ||| || ||||| | | | Sbjct 173061 TTTGAGGCTCTGTACGAAAAGTACGAGCGCGAGGGC-CGTG---GCCGCAAG--ACGGTG 173008 Query 8218 CGCGACCTGCACC-GCGCCATT--ATC---GAATGTCAAAACGAAACCGGTATGCCGTAC 8271 || | | | | | | | ||| ||| ||| || | ||||| || | |||| | Sbjct 173007 CGGGCTCAGAAGCTGTGGTATTCTATCCTGGAAGTACAGACGGAAACGGGCAACCCGTTC 172948 Query 8272 ATGCTGTACAAAGACGCTTGCAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGT 8331 ||||||||||| || ||||||| ||| |||||||||| ||| ||||||||||| | Sbjct 172947 ATGCTGTACAAGGATCATTGCAACCGCAAGAGCAATCAAAAGAACCTGGGCACCATTCGG 172888 Query 8332 TGCAGCAATCTGTGCGCTGAAATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGC 8391 | || || ||| | ||||| || ||||| || || || ||||| || || ||| Sbjct 172887 AGTTCGAACCTTTGCACGGAAATCGTTGAGTACTCTGCACCTGATGAAGTTGCTGTCTGC 172828 Query 8392 AATCTAGCGTCG 8403 ||||| || ||| Sbjct 172827 AATCTGGCCTCG 172816 >seq12 Length=470578 Score = 98.7 bits (108), Expect = 1e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| | |||||| || || || |||||||| ||| | || | || || Sbjct 224093 ACAAGGTGCAACGTGGACTCTTTCTGGATGTTGTAATCGGACAGAGTTCGGCCATCCTCA 224034 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| ||||| |||| ||||| ||||| || || || || || || || || Sbjct 224033 AGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGATCAGGGGGAATACCCTCCTTGTCCTGG 223974 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 ||||| || || || | |||||||||||||| || || | ||| || || || Sbjct 223973 ATTTTCGACTTCACATTATCGATGGTGTCGGACGATTCGACTTCCAAAGTGATCGTCTTG 223914 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| || || || || |||||||| Sbjct 223913 CCAGTTAATGTCTTCACAAAGATTTGCAT 223885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505394748496560