Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq69 113 5e-20
seq12 98.7 1e-15
>seq69
Length=174959
Score = 113 bits (124), Expect = 5e-20
Identities = 544/852 (64%), Gaps = 20/852 (2%)
Strand=Plus/Minus
Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623
||||||||| | ||||||| || ||||| || ||||| | || ||| | | |
Sbjct 173659 CAACACATGATCATGCGCGTTGCCGTGGGTATATGGGGCGACAATATCGACCGAGTCCTC 173600
Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCC 7683
||||||||| | | ||||| || | || || || || ||||| | |||| |
Sbjct 173599 GAAACGTACAACCTCATGTCCAGCAAGCTCTTCACCCATGCGTCGCCGGCGCTGTTCAAC 173540
Query 7684 GCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGC 7743
|| ||||| | ||| |||||||||| || | | |||| || ||||||
Sbjct 173539 GCTGGCACGCCTCAGTGCCAACTGTCCTCGTGCTTCCTCGTTGACATGAAGGATGACAGC 173480
Query 7744 ATCGACGGCATTTACAACACGCTGCGCGAT-TGCGCCAATATTTCCAAATACGGCGGCGG 7802
||||| ||||||||| ||||||| | || ||||||| || || || | ||| ||
Sbjct 173479 ATCGAGGGCATTTACGACACGCT-CAAGACGTGCGCCATGATCTCTAAGATGGCCGGTGG 173421
Query 7803 AATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGG 7862
|| || || ||||| | | || || | ||| |||| | |||||||||
Sbjct 173420 CATCGGGCTCAACGTGCATCGGATCCGTGCTACCGGCTCTTGCATTGCCGGCACCAACGG 173361
Query 7863 AAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGA 7922
| | | |||| | |||||| | || || || || ||| ||| || | || ||
Sbjct 173360 GACCTCGAACGGTGTCATTCCCATGCTTCGTGTCTTTAACAACACGGCCCGCTACGTCGA 173301
Query 7923 CCAGGGGGGAAA---GCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCG-TGGCACGCGG 7978
|||||| || || ||| ||| ||| |||||| || ||||||| ||||| || |
Sbjct 173300 CCAGGGCGGCAACAAGCGGCCAGGTGCCTTTGCCATATACCTGGAGCCAATGGCATGCTG 173241
Query 7979 ACATTTACGCAGTGCTAAATCTGCGTCGCAAC-ATGGGTTGCGAAGACAGCAAAGCGCGC 8037
| | | | | || || |||| ||| |||| | || || ||| |||
Sbjct 173240 ATGTCTTTGAGTTTCTGGATTTGCGCAAGAACCATGGCAAG-GAGGAGGTTCGAGCTCGC 173182
Query 8038 GATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACGCA 8097
|| || ||||| | ||||| | ||||| ||||| |||| |||||| | |||
Sbjct 173181 GACCTCTTCTTAGCCCTGTGGATTCCCGACCTGTTCATGAAGCGCGTGGAGAAAAACGGT 173122
Query 8098 CAATGGTCGCTCATGTGCCCCGATCGTTGCCCTTTATTAAAAAACGTTTACGGTTCAAAA 8157
| ||| |||||||||||||| | || || | || ||||| ||
Sbjct 173121 GATTGGACGCTCATGTGCCCCAACGAATGTCCCGGTCTGGCCGACTGCTACGGCGATGAA 173062
Query 8158 TTTGAACAATTGTACAAACAATACGAACACGACGGCGCGTACGTGCGGCAAGTGAAAGCG 8217
||||| ||||| || | ||||| | ||| ||| ||| || ||||| | | |
Sbjct 173061 TTTGAGGCTCTGTACGAAAAGTACGAGCGCGAGGGC-CGTG---GCCGCAAG--ACGGTG 173008
Query 8218 CGCGACCTGCACC-GCGCCATT--ATC---GAATGTCAAAACGAAACCGGTATGCCGTAC 8271
|| | | | | | | | ||| ||| ||| || | ||||| || | |||| |
Sbjct 173007 CGGGCTCAGAAGCTGTGGTATTCTATCCTGGAAGTACAGACGGAAACGGGCAACCCGTTC 172948
Query 8272 ATGCTGTACAAAGACGCTTGCAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGT 8331
||||||||||| || ||||||| ||| |||||||||| ||| ||||||||||| |
Sbjct 172947 ATGCTGTACAAGGATCATTGCAACCGCAAGAGCAATCAAAAGAACCTGGGCACCATTCGG 172888
Query 8332 TGCAGCAATCTGTGCGCTGAAATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGC 8391
| || || ||| | ||||| || ||||| || || || ||||| || || |||
Sbjct 172887 AGTTCGAACCTTTGCACGGAAATCGTTGAGTACTCTGCACCTGATGAAGTTGCTGTCTGC 172828
Query 8392 AATCTAGCGTCG 8403
||||| || |||
Sbjct 172827 AATCTGGCCTCG 172816
>seq12
Length=470578
Score = 98.7 bits (108), Expect = 1e-15
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|| ||||| | |||||| || || || |||||||| ||| | || | || ||
Sbjct 224093 ACAAGGTGCAACGTGGACTCTTTCTGGATGTTGTAATCGGACAGAGTTCGGCCATCCTCA 224034
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||| ||||| ||||| |||| ||||| ||||| || || || || || || || ||
Sbjct 224033 AGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGATCAGGGGGAATACCCTCCTTGTCCTGG 223974
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
||||| || || || | |||||||||||||| || || | ||| || || ||
Sbjct 223973 ATTTTCGACTTCACATTATCGATGGTGTCGGACGATTCGACTTCCAAAGTGATCGTCTTG 223914
Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| ||||| || || || || ||||||||
Sbjct 223913 CCAGTTAATGTCTTCACAAAGATTTGCAT 223885
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505394748496560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |