Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20yeast- like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq12 91.5 1e-13 seq70 84.2 2e-11 >seq12 Length=470578 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || |||||||| || | || | || ||||| || ||||| || || ||||| ||| | Sbjct 224111 CCGCCGCGCAAACGAAGGACAAGGTGCAACGTGGACTCTTTCTGGATGTTGTAATCGGAC 224052 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | || | || || ||||| || || || | || || ||||||||||| || || Sbjct 224051 AGAGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGATCAGGGGGA 223992 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | |||||| || || ||| || |||| | || | ||||| | | ||| ||| Sbjct 223991 ATACCCTCCTTGTCCTGGATTTTCGACTTCACATTATCGATGGTGTCGGACGATTCGACT 223932 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || | ||| || | ||||| || | || |||||||||||||||||| Sbjct 223931 TCCAAAGTGATCGTCTTGCCAGTTAATGTCTTCACAAAGATTTGCATA 223884 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 ||||| ||||||||||| ||||||| | || | ||||| || ||||| ||||| | Sbjct 224303 TCTTTCTGAATATTGTAATCGCTCAGAGTACGTCCATCTTCCAGTTGTTTTCCGGCAAAT 224244 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 ||||| |||||||| || || || | || || || || || || |||| | Sbjct 224243 ATGAGGCGCTGTTGGTCGGGGGGAATGCCTTCCTTGTCTTGTATTTTCGACTTCACATTG 224184 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | || || | | ||||||||| | ||| || | || ||||||| ||| || || Sbjct 224183 TCAATCGTATCCGAAGATTCAACTTCCAAAGTAATCGTCTTTCCCGTCAAAGTCTTGACG 224124 Query 27237 AAGATTTGCATA 27248 || ||||||||| Sbjct 224123 AATATTTGCATA 224112 >seq70 Length=137430 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || || || || |||||||||| | | || | ||||||||||| || ||||| | Sbjct 82943 TCCTTCTGTATGTTATAGTCGCTCAGGGTTCGGCCATCTTCGAGCTGCTTTCCGGCAAAG 82884 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 ||||| ||||| || || || || | ||||| || || |||||| || | | | Sbjct 82883 ATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTG 82824 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | ||||| | | || || || ||||| || | || || || || ||||| ||| Sbjct 82823 TCGATGGTGTCAGAAGACTCCACCTCAAGAGTGATTGTCTTCCCTGTGAGGGTTTTGACA 82764 Query 27237 AAGATTTGCAT 27247 ||||| ||||| Sbjct 82763 AAGATCTGCAT 82753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424931406602736