Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq69 93.3 1e-13
seq24 87.8 6e-12
>seq69
Length=174959
Score = 93.3 bits (102), Expect = 1e-13
Identities = 220/327 (67%), Gaps = 13/327 (4%)
Strand=Plus/Minus
Query 254978 ATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAA 255037
|| || ||| | ||||| || |||||| ||| ||||||||||| || || ||| |||
Sbjct 173344 ATTCCCATGCTTCGTGTCTTTAACAACACGGCCCGCTACGTCGACCAGGGCGGCAACAAG 173285
Query 255038 CGCCCAGGAGCGTTCACCATCTACCTGGAGCC-GTGGCACGCCGA---CATTGAACGGTT 255093
|| ||||| || || |||| ||||||||||| ||||| || || | |||| |||
Sbjct 173284 CGGCCAGGTGCCTTTGCCATATACCTGGAGCCAATGGCATGCTGATGTCTTTGA---GTT 173228
Query 255094 TTTACTGCTGTCCGACAAGACC---GGCACCGAGGAGCTGATCGCCCGCGACATCTACAC 255150
| | | | | || ||||| | |||| |||||| | || |||||| ||| |
Sbjct 173227 TCT--GGATTTGCG-CAAGAACCATGGCAAGGAGGAGGTTCGAGCTCGCGACCTCTTCTT 173171
Query 255151 CGCTGTCTGGTGCTGCGATCTGTTTATGCGACGCGTGGAACGAGACGAGACCTGGAGCCT 255210
|| | ||| ||| ||||| ||| |||||||| | ||| |||| ||
Sbjct 173170 AGCCCTGTGGATTCCCGACCTGTTCATGAAGCGCGTGGAGAAAAACGGTGATTGGACGCT 173111
Query 255211 CATGTGTCCCAACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGAAAAACT 255270
|||||| |||||| || |||||||| | ||||| | || || || ||||| ||
Sbjct 173110 CATGTGCCCCAACGAATGTCCCGGTCTGGCCGACTGCTACGGCGATGAATTTGAGGCTCT 173051
Query 255271 GTATCTGGAGTACGAGCGTGCCGGCCG 255297
||| |||||||||| | |||||
Sbjct 173050 GTACGAAAAGTACGAGCGCGAGGGCCG 173024
>seq24
Length=328731
Score = 87.8 bits (96), Expect = 6e-12
Identities = 112/153 (73%), Gaps = 1/153 (1%)
Strand=Plus/Plus
Query 443715 GTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTG 443774
|| || ||||| | |||||| || | || ||||| || |||| ||||||||||||||
Sbjct 173650 GTGGCCTTTGCCGCGGTCGAGGGTATCTTCTTTAGTGGTGCCTTT-GCCTCCATCTTCTG 173708
Query 443775 GTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAGTCGGGA 443834
| | || |||||||| || |||| || |||||||| |||||||| || || ||
Sbjct 173709 GCTCAAGAAGCGTGGCCTCATGCCTGGCTTGACCTTTTCCAACGAACTCATTTCGCGAGA 173768
Query 443835 CGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867
|| |||||||| ||||| || ||||| ||
Sbjct 173769 TGAAGGTTTGCACACGGACTTTGCATGTCTCCT 173801
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588324237379210
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |