Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20yeast- like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq69 93.3 1e-13 seq24 87.8 6e-12 >seq69 Length=174959 Score = 93.3 bits (102), Expect = 1e-13 Identities = 220/327 (67%), Gaps = 13/327 (4%) Strand=Plus/Minus Query 254978 ATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAA 255037 || || ||| | ||||| || |||||| ||| ||||||||||| || || ||| ||| Sbjct 173344 ATTCCCATGCTTCGTGTCTTTAACAACACGGCCCGCTACGTCGACCAGGGCGGCAACAAG 173285 Query 255038 CGCCCAGGAGCGTTCACCATCTACCTGGAGCC-GTGGCACGCCGA---CATTGAACGGTT 255093 || ||||| || || |||| ||||||||||| ||||| || || | |||| ||| Sbjct 173284 CGGCCAGGTGCCTTTGCCATATACCTGGAGCCAATGGCATGCTGATGTCTTTGA---GTT 173228 Query 255094 TTTACTGCTGTCCGACAAGACC---GGCACCGAGGAGCTGATCGCCCGCGACATCTACAC 255150 | | | | | || ||||| | |||| |||||| | || |||||| ||| | Sbjct 173227 TCT--GGATTTGCG-CAAGAACCATGGCAAGGAGGAGGTTCGAGCTCGCGACCTCTTCTT 173171 Query 255151 CGCTGTCTGGTGCTGCGATCTGTTTATGCGACGCGTGGAACGAGACGAGACCTGGAGCCT 255210 || | ||| ||| ||||| ||| |||||||| | ||| |||| || Sbjct 173170 AGCCCTGTGGATTCCCGACCTGTTCATGAAGCGCGTGGAGAAAAACGGTGATTGGACGCT 173111 Query 255211 CATGTGTCCCAACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGAAAAACT 255270 |||||| |||||| || |||||||| | ||||| | || || || ||||| || Sbjct 173110 CATGTGCCCCAACGAATGTCCCGGTCTGGCCGACTGCTACGGCGATGAATTTGAGGCTCT 173051 Query 255271 GTATCTGGAGTACGAGCGTGCCGGCCG 255297 ||| |||||||||| | ||||| Sbjct 173050 GTACGAAAAGTACGAGCGCGAGGGCCG 173024 >seq24 Length=328731 Score = 87.8 bits (96), Expect = 6e-12 Identities = 112/153 (73%), Gaps = 1/153 (1%) Strand=Plus/Plus Query 443715 GTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTG 443774 || || ||||| | |||||| || | || ||||| || |||| |||||||||||||| Sbjct 173650 GTGGCCTTTGCCGCGGTCGAGGGTATCTTCTTTAGTGGTGCCTTT-GCCTCCATCTTCTG 173708 Query 443775 GTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAGTCGGGA 443834 | | || |||||||| || |||| || |||||||| |||||||| || || || Sbjct 173709 GCTCAAGAAGCGTGGCCTCATGCCTGGCTTGACCTTTTCCAACGAACTCATTTCGCGAGA 173768 Query 443835 CGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867 || |||||||| ||||| || ||||| || Sbjct 173769 TGAAGGTTTGCACACGGACTTTGCATGTCTCCT 173801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588324237379210