Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq69 183 4e-41
seq18 84.2 3e-11
>seq69
Length=174959
Score = 183 bits (202), Expect = 4e-41
Identities = 698/1086 (64%), Gaps = 36/1086 (3%)
Strand=Plus/Plus
Query 110706 GGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGG 110765
|||||||||| | ||||| || || ||||| || || || || | |||||| | |||
Sbjct 172281 GGTAGATGTTGGACGTGTAAGGCTCGAAGCACTCGTTGTTGCCAAGGATTTGCGACGTGC 172340
Query 110766 AGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTT 110825
||| || ||||| || |||| || |||||||| || | || | ||||||||| | |
Sbjct 172341 TGGCCGTCGGCATAGGGGCCACCAGCAGACTGTTGCGTATGCCATACTCCTTGATCTGCT 172400
Query 110826 CCTTGAGAACATCCCAGTCGTAGTTGAGCTT----GGTTTCACCTTCCCACATGTCAAAC 110881
|| ||| ||||| || || |||| || |||||||||| |||| ||||||
Sbjct 172401 CCCGGAGCGTTTCCCACTCCCAG---AGCTCTGAAGGCTTCACCTTCC-ACATATCAAAC 172456
Query 110882 TGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCA 110941
|| ||||| || | ||||| || || || | ||| | |||| |||| | |
Sbjct 172457 TGGAGCACGCCCTCCGACGCAGGCGATCCTTTAAACGACGAGTAGGGCCCTTCGCTCTTT 172516
Query 110942 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 111001
|||| || || || | ||||| || ||||| || || || ||
Sbjct 172517 GCCAGCTCCATTGAGGCAGTCAACGCGGCGTGGTAGATGGTCTCGAATATTTTCTGGTTT 172576
Query 111002 ATCTCCTTGGCTTCATCTGAATCAAA-----TGCGTAGCGGCACAAAATAAATACATCCG 111056
| |||| ||| || || ||||| |||| || | || |||| |||| |
Sbjct 172577 AGCTCCCGGGCCTCCGGAGACTCAAACGGCATGCGGAGAGCCAGAAAAG-----CATCAG 172631
Query 111057 CGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCT 111116
| || || || ||||| | |||||| |||| ||| ||||| || ||| | || |
Sbjct 172632 CCAGGCCCTGGACACCAACACCAATCGGTCGGTGGCGCATGTTGCTGTTTTGGGCCTCTT 172691
Query 111117 CAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 111176
|||| || ||| || ||| |||| | || || || | || | || || |
Sbjct 172692 CAACTGGGTAATGGTTGACGTCGATGATCCTATTGAGGTTACGGACGACGACCTGCGTCA 172751
Query 111177 TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGG 111236
|| || || || | | || | || || | | ||| | || ||||
Sbjct 172752 CCTCGTGGAGCTTCTGGAAGTCGTAGCAGCCCTGGTCATAGTCGACGAAGGCAGGCAGGG 172811
Query 111237 CGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTG 111296
| | || |||| |||||| ||||| ||||| | | |||||| | ||||| |
Sbjct 172812 CTAGCGAGGCCAGATTGCAGACAGCAACTTCATCAGGTGCAGAGTACTCAACGATTTCCG 172871
Query 111297 TACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACG 111356
| || | ||| |||||| ||| || |||| |||||||| || ||||| ||||||
Sbjct 172872 TGCAAAGGTTCGAACTCCGAATGGTGCCCAGGTTCTTTTGATTGCTCTTGCGGTTGCAAT 172931
Query 111357 CATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCC 111416
||||||||| |||||| | || | ||||| ||||||||| || || |||| | ||
Sbjct 172932 GATCCTTGTACAGCATGAACGGGTTGCCCGTTTCCGTCTGTACTTCCAGGATAGAATACC 172991
Query 111417 AAA-CATCGGCGGCTGGTACAATGGCGTT-GGCC-CGTCCCTCCGCCTCGTACTTTGTGT 111473
| | | || | | | | || | | | |||| || ||||| |||||||||| ||
Sbjct 172992 ACAGCTTCTGAGCCCG---CACCGTCTTGCGGCCACGGCCCTCGCGCTCGTACTTTTCGT 173048
Query 111474 AGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGA 111533
| || || ||||| || || || ||||| ||||| || | || || || |
Sbjct 173049 ACAGAGCCTCAAATTCATCGCCGTAGCAGTCGGCCAGACCGGGACATTCGTTGGGGCACA 173108
Query 111534 AAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGG 111593
|| | ||| | ||| || ||| || ||||||||||| ||||| |||||||||||||
Sbjct 173109 TGAGCGTCCAATCACCGTTTTTCTCCACGCGCTTCATGAACAGGTCGGGAATCCACAGGG 173168
Query 111594 ATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGA 111653
| | ||||| || | | ||| |||| || | || ||||| || || || || |
Sbjct 173169 CTAAGAAGAGGTCGCGAGCTCGAACCTCCTCCTTGCCATGGTTCTTGCGCAAATCCAGAA 173228
Query 111654 ACTCCATGATATCCGCGTGCCA-TGGCTCAAGATAGACTGCGATAGATCC------CTT- 111705
|||| | || ||| || ||||| |||||| || || | || | | || |||
Sbjct 173229 ACTCAAAGACATCAGCATGCCATTGGCTCCAGGTATATGGCAAAGGCACCTGGCCGCTTG 173288
Query 111706 TCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAAT 111765
| | ||||| || | || ||||| || ||| |||||| || |||||||| |||||
Sbjct 173289 TTGCCGCCC----TGGTCGACGTAGCGGGCCGTGTTGTTAAAGACACGAAGCATGGGAAT 173344
Query 111766 AATACC 111771
| |||
Sbjct 173345 GACACC 173350
>seq18
Length=371689
Score = 84.2 bits (92), Expect = 3e-11
Identities = 214/320 (67%), Gaps = 7/320 (2%)
Strand=Plus/Plus
Query 11539 AAAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGG 11598
|||||||||||| |||| || | |||||| | ||| |||| || || || |||
Sbjct 185094 AAAGCCATCCATTTCGGCAAGGATTTGATTCAGTGTGGCCTCTCGTTCCTCGTTGCCTGT 185153
Query 11599 CATACCACCAGCACTGCGT--TG--CTTGCCCACCGCATCAATCTCATCAATGAAGACAA 11654
||| | | || ||| || |||||| | || ||||||||||| ||||||| |
Sbjct 185154 -ATAGCCTCGGCCTTGCACCCTGGACTTGCCAATAGCGTCAATCTCATCGATGAAGATTA 185212
Query 11655 TACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACAC 11714
||||||| ||| | || | | | || | ||||| || || | ||| ||||
Sbjct 185213 TACATGGAGCATTCTTACGACCCTCTGCGAATAAGTCGCGTACTCTGGACGAACCGACAC 185272
Query 11715 CAACAAACATCTCCACAAAGTTTGCGGCAGAG-CACTGGATGAATGGGACATTTGATTCA 11773
| ||||||||||||| ||| | | || | | ||| | || | ||| ||| ||
Sbjct 185273 CCACAAACATCTCCATAAACTCGGACCCACTGACGCTGAAA-AAGGCGACTCCTGACTCT 185331
Query 11774 CCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCG 11833
|| || |||| ||| ||||| || || ||||| || || || ||||||| ||
Sbjct 185332 CCAGCCGTGGCCTTGGCTAGGAGTGTTTTACCCGTGCCCGGAGGTCCGGCGAGAATAGCA 185391
Query 11834 CCTCGGGGGATCTTGGCACC 11853
|| || ||||||||||||||
Sbjct 185392 CCACGCGGGATCTTGGCACC 185411
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628027462468800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |