Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20yeast- like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq69 246 4e-60 seq18 96.9 4e-15 >seq69 Length=174959 Score = 246 bits (272), Expect = 4e-60 Identities = 960/1490 (64%), Gaps = 38/1490 (3%) Strand=Plus/Plus Query 118155 AACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCA 118214 ||||| ||||| || ||||| | | ||||| |||| |||||| ||||| |||||||| Sbjct 172256 AACTCGCCCGCCAGTACGCGTCGCTGGTAGATGTTGGACGTGTAAGGCTCGAAGCACTCG 172315 Query 118215 TTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTA 118274 ||||| || | |||||| | ||| ||| || ||||| || |||| || || ||||| Sbjct 172316 TTGTTGCCAAGGATTTGCGACGTGCTGGCCGTCGGCATAGGGGCCACCAGCAGACTGTTG 172375 Query 118275 CGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGT- 118333 || | || | ||| | || | ||| ||| | ||||| || || |||| || Sbjct 172376 CGTATGCCATACTCCTTGATCTGCTCCCGGAGCGTTTCCCACTCCCAG---AGCTCTGAA 172432 Query 118334 --CTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAAT 118391 || | ||| |||||||||||||||||| | || | ||||| |||||||| | ||| Sbjct 172433 GGCTTCACCTTCCACATATCAAACTGGAGCACGCCCTCCGACGCAGGCGATCCTTTAAAC 172492 Query 118392 GTCTCATATGGGCCCTCAACCTCCGCCAATTCG---GAGCTCGCCTCGAGGGCTGCGTGA 118448 | | || || || || || |||| || ||| | | | || ||||| Sbjct 172493 GACGAGTAGGGCCCTTCGCTCTTTGCCAGCTCCATTGAGGCAGTC---AACGCGGCGTGG 172549 Query 118449 TACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGT 118508 || || || || || || || | || |||||| || ||||||| | Sbjct 172550 TAGATGGTCTCGAATATTTTCTGGTTTAGCTCCCGGGCCTCCGGAGACTCAAACGGCATG 172609 Query 118509 CGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTC 118568 ||| | ||| |||| || || || |||||||| | ||||| || || || | | Sbjct 172610 CGGAGAGCCAGAAAAGCATCAGCCAGGCCCTGGACACCAACACCAATCGGTCGGTGGCGC 172669 Query 118569 ATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGA 118628 || || || | || || || || ||| || ||||| | |||||| || Sbjct 172670 ATGTTGCTGTTTTGGGCCTCTTCAACTGGGTAATGGTTGACGTCGATGATCCTATTGAGG 172729 Query 118629 TTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCT 118688 || | ||| |||| || | || || ||||| | | | || | | || || Sbjct 172730 TTACGGACGACGACCTGCGTCACCTCGTGGAGCTTCTGGAAGTCGTAGCAGCCCTGGTCA 172789 Query 118689 TCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTA 118748 | | ||| | ||| ||||| | || |||||||| || |||| ||||| Sbjct 172790 TAGTCGACGAAGGCAGGCAGGGCTAGCGAGGCCAGATTGCAGACAGCAACTTCATCAGGT 172849 Query 118749 TCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTT 118808 ||| |||||| | ||||||||||| | ||| |||||| ||||||||||| ||||||| Sbjct 172850 GCAGAGTACTCAACGATTTCCGTGCAAAGGTTCGAACTCCGAATGGTGCCCAGGTTCTTT 172909 Query 118809 TGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTT 118868 ||||| ||| ||| || ||||||||| |||||| | || | ||||| ||||| Sbjct 172910 TGATTGCTCTTGCGGTTGCAATGATCCTTGTACAGCATGAACGGGTTGCCCGTTTCCGTC 172969 Query 118869 TGGGACTT-GAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCC 118926 | | |||| || |||| | ||| | | || | ||| |||| || | | | || | Sbjct 172970 T-GTACTTCCAGGATAGAATACCACAGCTTCTG-AGCCCGCACCGTCTTGCGGCCACGGC 173027 Query 118927 CCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCC 118986 |||| |||||||||| ||| || || ||||| || || || | || | || | Sbjct 173028 CCTCGCGCTCGTACTTTTCGTACAGAGCCTCAAATTCATCGCCGTAGCAGTCGGCCAGAC 173087 Query 118987 CTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGA 119046 | || | | ||||| | ||| | ||| | ||| | ||| || |||||||||| Sbjct 173088 CGGGACATTCGTTGGGGCACATGAGCGTCCAATCACCGTTTTTCTCCACGCGCTTCATGA 173147 Query 119047 AGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCT 119106 | ||||| || ||||| || || ||||||| || ||| ||| | || || | || | Sbjct 173148 ACAGGTCGGGAATCCACAGGGCTAAGAAGAGGTCGCGAGCTCGAACCTCCTCCTTGCCAT 173207 Query 119107 GATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCA-CGGTTCCAGGTACACC 119165 | || ||||| |||| ||| || | || ||| || ||||| || |||||||| | Sbjct 173208 GGTTCTTGCGCAAATCCAGAAACTCAAAGACATCAGCATGCCATTGGCTCCAGGTATATG 173267 Query 119166 GCGA------TTGACCCCTTACGACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTA 119219 || | || || ||| | | || |||||| || || | || ||| |||| Sbjct 173268 GCAAAGGCACCTGGCCGCTT--GTTG-CCGCCCTGGTCGACGTAGCGGGCCGTGTTGTTA 173324 Query 119220 AATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGAC 119279 || ||||||||||| ||||||| ||| | || || || || || ||| | ||| Sbjct 173325 AAGACACGAAGCATGGGAATGACACCGTTCGAGGTCCCGTTGGTGCCGGCAATGCAAGAG 173384 Query 119280 TTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGC 119339 | || | || || | || | || || || || ||| ||| ||||| Sbjct 173385 CCGGTAGCACGGATCCGATGCACGTTGAGCCCGATGCCACCGGCCATCTTAGAGATCATG 173444 Query 119340 GCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGG 119399 |||||| | |||| || |||| || || ||||| |||| |||| | | | |||| Sbjct 173445 GCGCACGTCTTGAGCGTGTCGTAAATGCCCTCGATGCTGTCATCCTTCATGTCAACGAGG 173504 Query 119400 AAGCAGCTCGACATTTGAGGCCTG-GGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTG 119458 ||||| |||| ||| | ||| || || ||||||||||| || | || | ||| || Sbjct 173505 AAGCACGAGGACAGTTG-GCACTGAGGCGTGCCAGCGTTGAACAGCGCCGGCGACGCATG 173563 Query 119459 GATGAACATACCTTG--GGACATCTTGTCGTAGGTCTCCAAGAC---GGCGGGAATGTCT 119513 | ||| | | |||| |||||| || ||| || || | ||| | || | |||| Sbjct 173564 GGTGA--AGAGCTTGCTGGACATGAGGTTGTACGTTTCGAGGACTCGGTCGATATTGTC- 173620 Query 119514 TCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATA 119573 |||| | ||||| | | || ||||| | ||||| |||||| || | | | Sbjct 173621 GCCCCAT--ATACCCACGGCAACGCGCATGATCATGTGTTGGGGGCGCTCAACGATCTTG 173678 Query 119574 CCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 119623 || |||||| || | || ||| ||||| ||||||| |||||||| Sbjct 173679 CCGTCGAGCTTCAGCAGATAAGAACGCTCCAGAGTCTTGAAGCCAAAATA 173728 >seq18 Length=371689 Score = 96.9 bits (106), Expect = 4e-15 Identities = 158/226 (70%), Gaps = 4/226 (2%) Strand=Plus/Plus Query 14243 GCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAACTTCAAAGATA 14302 |||||||| ||||||||||| | |||||||| ||| | ||| | || | || | Sbjct 185188 GCGTCAATCTCATCGATGAAGATTATACATGGAGCATTCTTACGACCCTCTGCGAATAAG 185247 Query 14303 TCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGG--CGGCGGAAC 14360 || || ||||| | ||||||||||||||||||||||| ||| | || | | || Sbjct 185248 TCGCGTACTCTGGACGAACCGACACCCACAAACATCTCCATAAACTCGGACCCACTGACG 185307 Query 14361 ATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCG 14420 | || |||| ||| || || || || |||| ||| ||||| || || |||| Sbjct 185308 CT--GAAAAAGGCGACTCCTGACTCTCCAGCCGTGGCCTTGGCTAGGAGTGTTTTACCCG 185365 Query 14421 TCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 14466 | || || || ||||||| |||||||| |||||| ||||||| Sbjct 185366 TGCCCGGAGGTCCGGCGAGAATAGCACCACGCGGGATCTTGGCACC 185411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618430731805680