Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq69 246 4e-60
seq18 96.9 4e-15
>seq69
Length=174959
Score = 246 bits (272), Expect = 4e-60
Identities = 960/1490 (64%), Gaps = 38/1490 (3%)
Strand=Plus/Plus
Query 118155 AACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCA 118214
||||| ||||| || ||||| | | ||||| |||| |||||| ||||| ||||||||
Sbjct 172256 AACTCGCCCGCCAGTACGCGTCGCTGGTAGATGTTGGACGTGTAAGGCTCGAAGCACTCG 172315
Query 118215 TTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTA 118274
||||| || | |||||| | ||| ||| || ||||| || |||| || || |||||
Sbjct 172316 TTGTTGCCAAGGATTTGCGACGTGCTGGCCGTCGGCATAGGGGCCACCAGCAGACTGTTG 172375
Query 118275 CGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGT- 118333
|| | || | ||| | || | ||| ||| | ||||| || || |||| ||
Sbjct 172376 CGTATGCCATACTCCTTGATCTGCTCCCGGAGCGTTTCCCACTCCCAG---AGCTCTGAA 172432
Query 118334 --CTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAAT 118391
|| | ||| |||||||||||||||||| | || | ||||| |||||||| | |||
Sbjct 172433 GGCTTCACCTTCCACATATCAAACTGGAGCACGCCCTCCGACGCAGGCGATCCTTTAAAC 172492
Query 118392 GTCTCATATGGGCCCTCAACCTCCGCCAATTCG---GAGCTCGCCTCGAGGGCTGCGTGA 118448
| | || || || || || |||| || ||| | | | || |||||
Sbjct 172493 GACGAGTAGGGCCCTTCGCTCTTTGCCAGCTCCATTGAGGCAGTC---AACGCGGCGTGG 172549
Query 118449 TACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGT 118508
|| || || || || || || | || |||||| || ||||||| |
Sbjct 172550 TAGATGGTCTCGAATATTTTCTGGTTTAGCTCCCGGGCCTCCGGAGACTCAAACGGCATG 172609
Query 118509 CGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTC 118568
||| | ||| |||| || || || |||||||| | ||||| || || || | |
Sbjct 172610 CGGAGAGCCAGAAAAGCATCAGCCAGGCCCTGGACACCAACACCAATCGGTCGGTGGCGC 172669
Query 118569 ATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGA 118628
|| || || | || || || || ||| || ||||| | |||||| ||
Sbjct 172670 ATGTTGCTGTTTTGGGCCTCTTCAACTGGGTAATGGTTGACGTCGATGATCCTATTGAGG 172729
Query 118629 TTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCT 118688
|| | ||| |||| || | || || ||||| | | | || | | || ||
Sbjct 172730 TTACGGACGACGACCTGCGTCACCTCGTGGAGCTTCTGGAAGTCGTAGCAGCCCTGGTCA 172789
Query 118689 TCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTA 118748
| | ||| | ||| ||||| | || |||||||| || |||| |||||
Sbjct 172790 TAGTCGACGAAGGCAGGCAGGGCTAGCGAGGCCAGATTGCAGACAGCAACTTCATCAGGT 172849
Query 118749 TCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTT 118808
||| |||||| | ||||||||||| | ||| |||||| ||||||||||| |||||||
Sbjct 172850 GCAGAGTACTCAACGATTTCCGTGCAAAGGTTCGAACTCCGAATGGTGCCCAGGTTCTTT 172909
Query 118809 TGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTT 118868
||||| ||| ||| || ||||||||| |||||| | || | ||||| |||||
Sbjct 172910 TGATTGCTCTTGCGGTTGCAATGATCCTTGTACAGCATGAACGGGTTGCCCGTTTCCGTC 172969
Query 118869 TGGGACTT-GAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCC 118926
| | |||| || |||| | ||| | | || | ||| |||| || | | | || |
Sbjct 172970 T-GTACTTCCAGGATAGAATACCACAGCTTCTG-AGCCCGCACCGTCTTGCGGCCACGGC 173027
Query 118927 CCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCC 118986
|||| |||||||||| ||| || || ||||| || || || | || | || |
Sbjct 173028 CCTCGCGCTCGTACTTTTCGTACAGAGCCTCAAATTCATCGCCGTAGCAGTCGGCCAGAC 173087
Query 118987 CTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGA 119046
| || | | ||||| | ||| | ||| | ||| | ||| || ||||||||||
Sbjct 173088 CGGGACATTCGTTGGGGCACATGAGCGTCCAATCACCGTTTTTCTCCACGCGCTTCATGA 173147
Query 119047 AGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCT 119106
| ||||| || ||||| || || ||||||| || ||| ||| | || || | || |
Sbjct 173148 ACAGGTCGGGAATCCACAGGGCTAAGAAGAGGTCGCGAGCTCGAACCTCCTCCTTGCCAT 173207
Query 119107 GATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCA-CGGTTCCAGGTACACC 119165
| || ||||| |||| ||| || | || ||| || ||||| || |||||||| |
Sbjct 173208 GGTTCTTGCGCAAATCCAGAAACTCAAAGACATCAGCATGCCATTGGCTCCAGGTATATG 173267
Query 119166 GCGA------TTGACCCCTTACGACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTA 119219
|| | || || ||| | | || |||||| || || | || ||| ||||
Sbjct 173268 GCAAAGGCACCTGGCCGCTT--GTTG-CCGCCCTGGTCGACGTAGCGGGCCGTGTTGTTA 173324
Query 119220 AATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGAC 119279
|| ||||||||||| ||||||| ||| | || || || || || ||| | |||
Sbjct 173325 AAGACACGAAGCATGGGAATGACACCGTTCGAGGTCCCGTTGGTGCCGGCAATGCAAGAG 173384
Query 119280 TTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGC 119339
| || | || || | || | || || || || ||| ||| |||||
Sbjct 173385 CCGGTAGCACGGATCCGATGCACGTTGAGCCCGATGCCACCGGCCATCTTAGAGATCATG 173444
Query 119340 GCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGG 119399
|||||| | |||| || |||| || || ||||| |||| |||| | | | ||||
Sbjct 173445 GCGCACGTCTTGAGCGTGTCGTAAATGCCCTCGATGCTGTCATCCTTCATGTCAACGAGG 173504
Query 119400 AAGCAGCTCGACATTTGAGGCCTG-GGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTG 119458
||||| |||| ||| | ||| || || ||||||||||| || | || | ||| ||
Sbjct 173505 AAGCACGAGGACAGTTG-GCACTGAGGCGTGCCAGCGTTGAACAGCGCCGGCGACGCATG 173563
Query 119459 GATGAACATACCTTG--GGACATCTTGTCGTAGGTCTCCAAGAC---GGCGGGAATGTCT 119513
| ||| | | |||| |||||| || ||| || || | ||| | || | ||||
Sbjct 173564 GGTGA--AGAGCTTGCTGGACATGAGGTTGTACGTTTCGAGGACTCGGTCGATATTGTC- 173620
Query 119514 TCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATA 119573
|||| | ||||| | | || ||||| | ||||| |||||| || | | |
Sbjct 173621 GCCCCAT--ATACCCACGGCAACGCGCATGATCATGTGTTGGGGGCGCTCAACGATCTTG 173678
Query 119574 CCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 119623
|| |||||| || | || ||| ||||| ||||||| ||||||||
Sbjct 173679 CCGTCGAGCTTCAGCAGATAAGAACGCTCCAGAGTCTTGAAGCCAAAATA 173728
>seq18
Length=371689
Score = 96.9 bits (106), Expect = 4e-15
Identities = 158/226 (70%), Gaps = 4/226 (2%)
Strand=Plus/Plus
Query 14243 GCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAACTTCAAAGATA 14302
|||||||| ||||||||||| | |||||||| ||| | ||| | || | || |
Sbjct 185188 GCGTCAATCTCATCGATGAAGATTATACATGGAGCATTCTTACGACCCTCTGCGAATAAG 185247
Query 14303 TCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGG--CGGCGGAAC 14360
|| || ||||| | ||||||||||||||||||||||| ||| | || | | ||
Sbjct 185248 TCGCGTACTCTGGACGAACCGACACCCACAAACATCTCCATAAACTCGGACCCACTGACG 185307
Query 14361 ATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCG 14420
| || |||| ||| || || || || |||| ||| ||||| || || ||||
Sbjct 185308 CT--GAAAAAGGCGACTCCTGACTCTCCAGCCGTGGCCTTGGCTAGGAGTGTTTTACCCG 185365
Query 14421 TCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 14466
| || || || ||||||| |||||||| |||||| |||||||
Sbjct 185366 TGCCCGGAGGTCCGGCGAGAATAGCACCACGCGGGATCTTGGCACC 185411
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618430731805680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |