Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20yeast- like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq69 181 1e-40 >seq69 Length=174959 Score = 181 bits (200), Expect = 1e-40 Identities = 920/1442 (64%), Gaps = 46/1442 (3%) Strand=Plus/Minus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGG--AAGACATTGATTCT 104278 ||| || ||||| |||||||||| ||| | ||||| |||||| | | || || Sbjct 173663 CCCCCAACACATGATCATGCGCGTTGCCGTGGGTAT--ATGGGGCGACAATATCGACCGA 173606 Query 104279 GTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCC 104336 ||| | || || ||| || |||||| |||| | | ||| || || | || | | Sbjct 173605 GTCCTCGAAACGTACAACCTCATGTCCAGCAAGCTCT--TCACCCATGCGTCGCCGGCGC 173548 Query 104337 TCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGG 104396 | ||||| ||||| || || |||| ||||| |||||||| | | || |||| Sbjct 173547 TGTTCAACGCTGGCACGCCTCAGTGCCAACTGTCCTCGTGCTTCCTCGTTGACATGAAGG 173488 Query 104397 AGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGG 104456 | ||| ||| | || || || | || || | | ||| || ||||| ||| || Sbjct 173487 ATGACAGCATCGAGGGCATTTACGACACGCTCAAGACGTGCGCCATGATCTCTAAGATGG 173428 Query 104457 CTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGA 104516 | || || || ||| | || | ||| | | || | ||| | ||| || | Sbjct 173427 CCGGTGGCATCGGGCTCAACGTGCATCGGATCCGTGCTACCGGCTCTTGCATTGCCGGCA 173368 Query 104517 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 104576 | || || || | ||| | ||||| |||||||| || |||||| ||| || |||| Sbjct 173367 CCAACGGGACCTCGAACGGTGTCATTCCCATGCTTCGTGTCTTTAACAACACGGCCCGCT 173308 Query 104577 ATGTAAATCAAGCTGGGCGTCGA-AAG------GGATCTATCGCAGTCTATCTTGAGCCA 104629 | || | || ||||| | | ||| || | | || | || || |||||| Sbjct 173307 ACGTCGACCA----GGGCGGCAACAAGCGGCCAGGTGCCTTTGCCATATACCTGGAGCCA 173252 Query 104630 -TGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGC 104688 ||||| || ||| || | ||||| || || ||||| ||||| || | ||||||| Sbjct 173251 ATGGCATGCTGATGTCTTTGAGTTTCTGGATTTGCGCAAGAACCATGGCAAGGAGGAGGT 173192 Query 104689 GCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGA 104748 || ||||| ||||||| || || |||||||| || || ||||||||| | || || Sbjct 173191 TCGAGCTCGCGACCTCTTCTTAGCCCTGTGGATTCCCGACCTGTTCATGAAGCGCGTGGA 173132 Query 104749 GGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGT 104808 | | | || ||||| | ||| | || || || | || ||||| |||| | Sbjct 173131 GAAAAACGGTGATTGGACGCTCATGTGCCCCAACGAATGTCCCGGTCTGGCCGACTGCTA 173072 Query 104809 GGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCG-GGCGACTGCGA 104867 || || || ||||| || || ||| |||||||||| || || || ||| | || Sbjct 173071 CGGCGATGAATTTGAGGCTCTGTACGAAAAGTACGAGCGCGAGGGCCGTGGCCGCAA-GA 173013 Query 104868 CGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTC-AAGTCTCAAACCGAGACTGGTAC 104925 |||||| ||| | || | ||||| | |||| || |||| || || || || || | Sbjct 173012 CGGTGCGGGCT-CAGAAGCTGTGGTATTCTATCCTGGAAGTA-CAGACGGAAACGGGCAA 172955 Query 104926 ACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGT 104985 || | |||||| ||||| || || |||| ||||| ||||||||||| |||| Sbjct 172954 CCCGTTCATGCTGTACAAGGATCATTGCAACCGCAAGAGCAATCAAAAGAACCTGGGCAC 172895 Query 104986 GATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGC 105045 || |||||| || || || || |||||| | || | | | ||||| || Sbjct 172894 CATTCGGAGTTCGAACCTTTGCACGGAAATCGTTGAGTACTCTGCACCTGATGAAGTTGC 172835 Query 105046 TGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC--A 105103 ||| || || || || || | || || || | || || | ||| | | | Sbjct 172834 TGTCTGCAATCTGGCCTCGCTAGCCCTGCCTGCCTTCGTCGA--CTATGACCAGGGCTGC 172777 Query 105104 TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTT 105163 | || | | || |||||||| || ||| | ||| | ||||| || || | Sbjct 172776 TACGACTTCCAGAAGCTCCACGAGGTGACGCAGGTCGTCGTCCGTAACCTCAATAGGATC 172717 Query 105164 ATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCA 105223 || || || |||||| ||||| || | || || ||| | ||||| || Sbjct 172716 ATCGACGTCAACCATTACCCAGTTGAAGAGGCCCAAAACAGCAACATGCGCCACCGACCG 172657 Query 105224 ATTGGTCTCGGTGTTCAGGGTCTCGCGGATG-TATTCATTCTTTGTCGCCACGCATTTGA 105282 |||||| | ||||| ||||| || || |||| | ||| || | ||| | ||||| Sbjct 172656 ATTGGTGTTGGTGTCCAGGGCCTGGCTGATGCTTTTCTGGCTCT-CCGCATGCCGTTTGA 172598 Query 105283 TTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCT 105342 || || || ||| | || | ||||| |||||||| || |||||||| | Sbjct 172597 GTCTCCGGAGGCCCGGGAGCTAAACCAGAAAATATTCGAGACCATCTACCACGCCGC-GT 172539 Query 105343 TGAGGCGAGTTCA---GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 105399 ||| | ||| ||| ||||| || || || || || | ||| | || || Sbjct 172538 TGA--CTGCCTCAATGGAGCTGGCAAAGAGCGAAGGGCCCTACTCGTCGTTTAAAGGATC 172481 Query 105400 TCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACC----AAGCTTC 105455 || || || | || ||||| || |||||||||| ||||||||| || |||| Sbjct 172480 GCCTGCGTCGGAGGGCGTGCTCCAGTTTGATATGT-GGAAGGTGAAGCCTTCAGAGCT-- 172424 Query 105456 ACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCC 105515 || || |||||| | ||| ||| | ||||||||| | || | || |||||||| | Sbjct 172423 -CTGGGAGTGGGAAACGCTCCGGGAGCAGATCAAGGAGTATGGCATACGCAACAGTCTGC 172365 Query 105516 TCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 105575 | |||| || ||||| || ||| ||| | |||||| | || || || || ||||| | Sbjct 172364 TGGTGGCCCCTATGCCGACGGCCAGCACGTCGCAAATCCTTGGCAACAACGAGTGCTTCG 172305 Query 105576 AACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCA 105635 | || |||||| | |||||||| | | || | || ||||| ||||| | | |||| Sbjct 172304 AGCCTTACACGTCCAACATCTACCAGCGACGCGTACTGGCGGGCGAGTTCCAGGTGGTCA 172245 Query 105636 AC 105637 || Sbjct 172244 AC 172243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583256585940720