Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq69 181 1e-40
>seq69
Length=174959
Score = 181 bits (200), Expect = 1e-40
Identities = 920/1442 (64%), Gaps = 46/1442 (3%)
Strand=Plus/Minus
Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGG--AAGACATTGATTCT 104278
||| || ||||| |||||||||| ||| | ||||| |||||| | | || ||
Sbjct 173663 CCCCCAACACATGATCATGCGCGTTGCCGTGGGTAT--ATGGGGCGACAATATCGACCGA 173606
Query 104279 GTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCC 104336
||| | || || ||| || |||||| |||| | | ||| || || | || | |
Sbjct 173605 GTCCTCGAAACGTACAACCTCATGTCCAGCAAGCTCT--TCACCCATGCGTCGCCGGCGC 173548
Query 104337 TCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGG 104396
| ||||| ||||| || || |||| ||||| |||||||| | | || ||||
Sbjct 173547 TGTTCAACGCTGGCACGCCTCAGTGCCAACTGTCCTCGTGCTTCCTCGTTGACATGAAGG 173488
Query 104397 AGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGG 104456
| ||| ||| | || || || | || || | | ||| || ||||| ||| ||
Sbjct 173487 ATGACAGCATCGAGGGCATTTACGACACGCTCAAGACGTGCGCCATGATCTCTAAGATGG 173428
Query 104457 CTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGA 104516
| || || || ||| | || | ||| | | || | ||| | ||| || |
Sbjct 173427 CCGGTGGCATCGGGCTCAACGTGCATCGGATCCGTGCTACCGGCTCTTGCATTGCCGGCA 173368
Query 104517 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 104576
| || || || | ||| | ||||| |||||||| || |||||| ||| || ||||
Sbjct 173367 CCAACGGGACCTCGAACGGTGTCATTCCCATGCTTCGTGTCTTTAACAACACGGCCCGCT 173308
Query 104577 ATGTAAATCAAGCTGGGCGTCGA-AAG------GGATCTATCGCAGTCTATCTTGAGCCA 104629
| || | || ||||| | | ||| || | | || | || || ||||||
Sbjct 173307 ACGTCGACCA----GGGCGGCAACAAGCGGCCAGGTGCCTTTGCCATATACCTGGAGCCA 173252
Query 104630 -TGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGC 104688
||||| || ||| || | ||||| || || ||||| ||||| || | |||||||
Sbjct 173251 ATGGCATGCTGATGTCTTTGAGTTTCTGGATTTGCGCAAGAACCATGGCAAGGAGGAGGT 173192
Query 104689 GCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGA 104748
|| ||||| ||||||| || || |||||||| || || ||||||||| | || ||
Sbjct 173191 TCGAGCTCGCGACCTCTTCTTAGCCCTGTGGATTCCCGACCTGTTCATGAAGCGCGTGGA 173132
Query 104749 GGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGT 104808
| | | || ||||| | ||| | || || || | || ||||| |||| |
Sbjct 173131 GAAAAACGGTGATTGGACGCTCATGTGCCCCAACGAATGTCCCGGTCTGGCCGACTGCTA 173072
Query 104809 GGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCG-GGCGACTGCGA 104867
|| || || ||||| || || ||| |||||||||| || || || ||| | ||
Sbjct 173071 CGGCGATGAATTTGAGGCTCTGTACGAAAAGTACGAGCGCGAGGGCCGTGGCCGCAA-GA 173013
Query 104868 CGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTC-AAGTCTCAAACCGAGACTGGTAC 104925
|||||| ||| | || | ||||| | |||| || |||| || || || || || |
Sbjct 173012 CGGTGCGGGCT-CAGAAGCTGTGGTATTCTATCCTGGAAGTA-CAGACGGAAACGGGCAA 172955
Query 104926 ACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGT 104985
|| | |||||| ||||| || || |||| ||||| ||||||||||| ||||
Sbjct 172954 CCCGTTCATGCTGTACAAGGATCATTGCAACCGCAAGAGCAATCAAAAGAACCTGGGCAC 172895
Query 104986 GATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGC 105045
|| |||||| || || || || |||||| | || | | | ||||| ||
Sbjct 172894 CATTCGGAGTTCGAACCTTTGCACGGAAATCGTTGAGTACTCTGCACCTGATGAAGTTGC 172835
Query 105046 TGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC--A 105103
||| || || || || || | || || || | || || | ||| | | |
Sbjct 172834 TGTCTGCAATCTGGCCTCGCTAGCCCTGCCTGCCTTCGTCGA--CTATGACCAGGGCTGC 172777
Query 105104 TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTT 105163
| || | | || |||||||| || ||| | ||| | ||||| || || |
Sbjct 172776 TACGACTTCCAGAAGCTCCACGAGGTGACGCAGGTCGTCGTCCGTAACCTCAATAGGATC 172717
Query 105164 ATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCA 105223
|| || || |||||| ||||| || | || || ||| | ||||| ||
Sbjct 172716 ATCGACGTCAACCATTACCCAGTTGAAGAGGCCCAAAACAGCAACATGCGCCACCGACCG 172657
Query 105224 ATTGGTCTCGGTGTTCAGGGTCTCGCGGATG-TATTCATTCTTTGTCGCCACGCATTTGA 105282
|||||| | ||||| ||||| || || |||| | ||| || | ||| | |||||
Sbjct 172656 ATTGGTGTTGGTGTCCAGGGCCTGGCTGATGCTTTTCTGGCTCT-CCGCATGCCGTTTGA 172598
Query 105283 TTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCT 105342
|| || || ||| | || | ||||| |||||||| || |||||||| |
Sbjct 172597 GTCTCCGGAGGCCCGGGAGCTAAACCAGAAAATATTCGAGACCATCTACCACGCCGC-GT 172539
Query 105343 TGAGGCGAGTTCA---GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 105399
||| | ||| ||| ||||| || || || || || | ||| | || ||
Sbjct 172538 TGA--CTGCCTCAATGGAGCTGGCAAAGAGCGAAGGGCCCTACTCGTCGTTTAAAGGATC 172481
Query 105400 TCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACC----AAGCTTC 105455
|| || || | || ||||| || |||||||||| ||||||||| || ||||
Sbjct 172480 GCCTGCGTCGGAGGGCGTGCTCCAGTTTGATATGT-GGAAGGTGAAGCCTTCAGAGCT-- 172424
Query 105456 ACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCC 105515
|| || |||||| | ||| ||| | ||||||||| | || | || |||||||| |
Sbjct 172423 -CTGGGAGTGGGAAACGCTCCGGGAGCAGATCAAGGAGTATGGCATACGCAACAGTCTGC 172365
Query 105516 TCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 105575
| |||| || ||||| || ||| ||| | |||||| | || || || || ||||| |
Sbjct 172364 TGGTGGCCCCTATGCCGACGGCCAGCACGTCGCAAATCCTTGGCAACAACGAGTGCTTCG 172305
Query 105576 AACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCA 105635
| || |||||| | |||||||| | | || | || ||||| ||||| | | ||||
Sbjct 172304 AGCCTTACACGTCCAACATCTACCAGCGACGCGTACTGGCGGGCGAGTTCCAGGTGGTCA 172245
Query 105636 AC 105637
||
Sbjct 172244 AC 172243
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583256585940720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |