Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq84 269 8e-67
seq12 150 5e-31
seq14 109 2e-18
seq11 95.1 4e-14
>seq84
Length=74915
Score = 269 bits (298), Expect = 8e-67
Identities = 960/1481 (65%), Gaps = 26/1481 (2%)
Strand=Plus/Plus
Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256
|||| | || ||||| || ||||| || || || || || | | | | | | ||||
Sbjct 23718 CCGCCGTCGGCATCGACTTGGGTACCACGTACTCGTGCGTGGGCATCTTCCGAGAGGATC 23777
Query 349257 G-TGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTT 349315
| ||| || || ||||| ||||||||||| || | || || || || | ||| || ||
Sbjct 23778 GGTGT-GAGATCATTGCCAATGATCAAGGCAATCGCACCACTCCCTCCTTCGTCGCTTTC 23836
Query 349316 ACCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAA 349375
|| || || ||||| ||||||| ||| | || || ||||||| || || || |
Sbjct 23837 ACGGACACAGAGCGCCTGATTGGCGATGCCGCGAAGAATCAAGTGGCCATGAACCCTCAT 23896
Query 349376 AATACGGTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTTTTC--TGACAAATCTACA 349432
|| || || || ||||| ||||| | ||||| | || || | || | || |
Sbjct 23897 AACACTGTCTTCGATGCGAAGCGGTTGATTGGACGCAAATTCAGCGATGCCGAAGTT--- 23953
Query 349433 CAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATT 349492
|| | || | || ||||| ||||||| ||||| |||| ||| || || |
Sbjct 23954 CAGGCCGACATGAAGCATTTCCCTTTTAAAATTGTTGATAAAGCCGGC---AAGCCCGTG 24010
Query 349493 ATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATG 349552
|| || ||||| | || || || | || ||| ||| |||||||| || || |||
Sbjct 24011 ATAGAAGTTGAGTTCAAGGGAGAGAAGAAGACATTCACACCTGAAGAAATCTCTTCGATG 24070
Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGA-AGCATATTTAGGTGAAACAGTAACTGATGC 349611
|| || ||| ||| || | ||| || ||| ||| | |||| || || || | ||
Sbjct 24071 GTGTTGACTAAGATGCGCGAGACTGCCGAGAGC-TATCTTGGTGGCACTGTCACCAACGC 24129
Query 349612 TGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGG 349671
|| || ||||| || ||||| || || || ||| ||| || || || || || ||
Sbjct 24130 CGTCATCACTGTCCCTGCCTACTTCAACGACAGCCAACGTCAAGCCACCAAGGACGCCGG 24189
Query 349672 CAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGC 349731
| |||||| || | ||||| || | || ||||| ||||| || || || || |||||
Sbjct 24190 CCTCATTGCAGGTCTGAATGTCCTGCGCATTATTAACGAACCTACGGCGGCTGCCATTGC 24249
Query 349732 ATATGGGCTTGATAAAATGAGTG-ACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTG 349790
||||| || ||||| | |||| | || || | || |||||||| |||||||
Sbjct 24250 TTATGGCCTGGATAAGAA-AGTGGAGGGCGAGCGCAACGTCCTCATTTTTGACTTAGGTG 24308
Query 349791 GTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAA 349850
||||||| || |||||||| || || || |||| |||||||| || || || || | |
Sbjct 24309 GTGGTACATTCGATGTATCCCTCCTTACCATTGAGGAGGGAATATTCGAGGTCAAGTCGA 24368
Query 349851 CTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTG 349910
| ||||| ||||| ||||||||||| || ||||| || |||||| | || || || |
Sbjct 24369 CAGCTGGCGATACCCATCTTGGTGGTGAGGATTTCGACAATCGTTTGGTCAACCACTTCG 24428
Query 349911 TTAAAGAATTTAAGCGTCAAGC-TAAAATTGA--TATTGGAGATAATCCTAGAGCAATGC 349967
| || ||||| ||||| ||||| || | || | | || | || | || | |
Sbjct 24429 TGAACGAATTCAAGCG-CAAGCACAAGAAGGACTTGTCCTCGAACAGCC--GTGCCCTTC 24485
Query 349968 GTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCT 350027
| || || | ||||| || || || || ||||| | | || || | | || ||||
Sbjct 24486 GCCGACTTCGCACTGCCTGCGAGCGAGCCAAGCGCACACTGTCTTCCTCGGCACAGACCT 24545
Query 350028 CTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTC 350087
| || || ||||| ||||| ||| || | ||||||| |||| || || |||||||
Sbjct 24546 CGATCGAGATTGACTCTCTGTTTGAGGGTATCGATTTCTACACATCCATCACCCGTGCTC 24605
Query 350088 GGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTAT 350147
| || || || | || ||| | || | | || || | || || || ||
Sbjct 24606 GTTTCGAGGAGCTTTGCCAAGATTTGTTCCGCTCTACCATCCAGCCAGTCGACCGCGTTC 24665
Query 350148 TAAAAGATGCAAAAATGTCCAAAAATCAGA-TTGATGAAGTAGTTTTAGTTGGTGGTTCT 350206
| ||||| || || | || | || | || |||| | || | || || || |||
Sbjct 24666 TTGCGGATGCCAAGAT-TGATAAGAGCAAAGTTCATGAGATTGTCCTTGTCGGCGGCTCT 24724
Query 350207 ACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCT 350266
|| || || || |||| || | | | || | || || |||||||| ||
Sbjct 24725 ACTCGCATCCCCCGCATTCAGAAGCTCATTACCGACTACTTCAACGGCAAAGAGCCCAAC 24784
Query 350267 AGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTA 350326
| || || || || || ||||| ||||| || || || || || ||||| | ||| ||
Sbjct 24785 AAGTCTATCAACCCCGACGAAGCCGTTGCCTACGGCGCAGCCGTCCAGGCTGCCATTCTA 24844
Query 350327 TCTGGAAATAAGAGTTCTAA---AATTGATGATCTATTACTACTAGATGTAACTCCACTT 350383
||||| | | ||| || | | | || | ||||| | || || | || ||
Sbjct 24845 TCTGGCGACACTTCTTCCAAGTCGACTAACGAGATCCTACTATTGGACGTTGCGCCCCTG 24904
Query 350384 TCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACT 350443
|| ||||| | || ||| | || | | ||||| || |||||| | || | ||
Sbjct 24905 TCCCTTGGTATCGAGACTGCCGGCGGCATGATGACCAAGCTGATTCCTCGTAACACCACC 24964
Query 350444 GTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACA 350503
| || || || ||||| | | ||||| |||||| | || || || || | ||
Sbjct 24965 ATTCCCACTAAGAAGTCTGAGATCTTTTCGACATTTTCCGACAACCAACCCGGTGTCCTC 25024
Query 350504 ATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTT 350563
||||| |||| || || || || ||||| || || || || ||||| | |||
Sbjct 25025 ATTCAGGTATACGAGGGAGAGCGCCAGCGCACCAAGGACAACAACCTGCTTGGCAAGTTT 25084
Query 350564 ACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGAT 350623
|| | || ||||| || |||| | || ||||| ||||| || ||| |||| ||
Sbjct 25085 GAGCTTACTGGCATTCCGCCTGCGCCTCGCGGTGTTCCCCAGATCGAGGTCACTTTTGAC 25144
Query 350624 ATTGATTCAAATGGTATTTTAAATGTTACCGCAGTTGAAAA 350664
||||| | || || || | |||||| | || || |||||
Sbjct 25145 GTTGATGCTAACGGCATCATGAATGTTTCGGCCGTGGAAAA 25185
Score = 93.3 bits (102), Expect = 1e-13
Identities = 87/111 (78%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 183681 TCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCG 183740
|| ||||| |||||||| | ||| ||||||||||| || | || || || ||||||||
Sbjct 24405 TCGAAATCCTCACCACCAAGATGGGTATCGCCAGCTGTCGACTTGACCTCGAATATTCCC 24346
Query 183741 TCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAAA 183791
|| ||||| | | | |||||||| |||||||||||||| || ||||||
Sbjct 24345 TCCTCAATGGTAAGGAGGGATACATCGAATGTACCACCACCTAAGTCAAAA 24295
>seq12
Length=470578
Score = 150 bits (166), Expect = 5e-31
Identities = 180/243 (74%), Gaps = 1/243 (0%)
Strand=Plus/Minus
Query 140495 ACTAATATTTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTG 140554
|| ||||||| |||||| || || || | || ||||| || | || |||||||| ||
Sbjct 224126 ACGAATATTTG-CATACCGCCGCGCAAACGAAGGACAAGGTGCAACGTGGACTCTTTCTG 224068
Query 140555 AATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACG 140614
|| || ||||| || | ||||| ||||| ||||| || || ||||||||||| || ||
Sbjct 224067 GATGTTGTAATCGGACAGAGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCG 224008
Query 140615 TTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGA 140674
|| |||||||| ||||| || || || ||||| ||||| | || |||||||| || |
Sbjct 224007 CTGTTGATCAGGGGGAATACCCTCCTTGTCCTGGATTTTCGACTTCACATTATCGATGGT 223948
Query 140675 ATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTG 140734
|| || | ||| ||||| | || | ||||| || |||| ||| || ||||| || ||
Sbjct 223947 GTCGGACGATTCGACTTCCAAAGTGATCGTCTTGCCAGTTAATGTCTTCACAAAGATTTG 223888
Query 140735 CAT 140737
|||
Sbjct 223887 CAT 223885
Score = 134 bits (148), Expect = 4e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570
|||||||| | | || ||||| || | ||| ||||| |||||||| |||||
Sbjct 224339 CCACCACGAAGACGCAGCACAAGGTGCAAAGTGCTTTCTTTCTGAATATTGTAATCGCTC 224280
Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630
| || || |||||||| ||||||||||| ||||| || || || || || || || |||
Sbjct 224279 AGAGTACGTCCATCTTCCAGTTGTTTTCCGGCAAATATGAGGCGCTGTTGGTCGGGGGGA 224220
Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690
|| ||||| || || || ||||| | || ||||| ||||||| ||| || | |||||||
Sbjct 224219 ATGCCTTCCTTGTCTTGTATTTTCGACTTCACATTGTCAATCGTATCCGAAGATTCAACT 224160
Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| | |||| |||||||| || | || || || || || |||||
Sbjct 224159 TCCAAAGTAATCGTCTTTCCCGTCAAAGTCTTGACGAATATTTGCAT 224113
Score = 86.0 bits (94), Expect = 2e-11
Identities = 159/233 (68%), Gaps = 3/233 (1%)
Strand=Plus/Minus
Query 349655 GCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCC 349714
|| || || ||||| ||| ||| || || || || ||||| | || | || || |||
Sbjct 137467 GCCACCAAGGATGCCGGCGTCATCGCCGGCTTGAACGTTCTCCGCATCGTCAACGAGCCC 137408
Query 349715 ACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTT 349774
|| || || || || || || || | || || | | || | ||| ||||| |
Sbjct 137407 ACGGCCGCGGCCATAGCCTACGGTTTGGACAAGACGGATGGC---GAACGGCATATTATC 137351
Query 349775 ATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATT 349834
| | |||| | |||||||||||||| || || || | ||| || |||| |||| ||
Sbjct 137350 GTGTATGATCTCGGTGGTGGTACTTTCGACGTGTCTGTGCTATCAATTGAGCAGGGCGTT 137291
Query 349835 TTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGA 349887
|| ||||| || || |||||||| || || |||||||| ||||| || ||
Sbjct 137290 TTCGAAGTGCTTGCCACCGCTGGTGACACGCACCTTGGTGGTGAAGACTTCGA 137238
>seq14
Length=772799
Score = 109 bits (120), Expect = 2e-18
Identities = 132/180 (73%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609
||||| || || ||||| || | ||||| ||||||||||| || || || || |||||
Sbjct 69850 TTTTGGATGTTGTAATCGGACAGGGTTCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATC 69909
Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669
|| ||||| ||||| |||||||| | || ||||||||||| || | ||| | |||||
Sbjct 69910 AGTCGTTGTTGATCCGGAGGAATAACCTCCTTATCCTGAATCTTGGATTTAAAGTTATCG 69969
Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAA 140729
|||| || || | || || || || || | || || || ||||| || || || |||
Sbjct 69970 ATCGTTTCCGACGACTCGACCTCGAGGGTGATGGTTTTGCCCGTTAGGGTCTTGACGAAA 70029
>seq11
Length=470063
Score = 95.1 bits (104), Expect = 4e-14
Identities = 194/285 (68%), Gaps = 5/285 (2%)
Strand=Plus/Plus
Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669
|| || || ||||| || || || || || || ||||| || || || |||||
Sbjct 324958 GCCGTCATCACTGTGCCCGCTTACTTCAACGACAATCAGCGCCAGGCCACCAAGGATGCG 325017
Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729
|| |||||| || | ||||| || | || ||||| || ||||| |||||||||||
Sbjct 325018 GGTGCCATTGCCGGTCTCAATGTGCTGCGCATCATTAACGAGCCCACCGCTGCAGCAATC 325077
Query 349730 GCATATGGGCTTG---ATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTA 349786
|| ||||| |||| | | | ||| | || |||| |||| |||| ||| |
Sbjct 325078 GCCTATGGCCTTGGCTCTGGCAAGTCGGACAAGGAGCGAAATGTTCTCATTTACGATCTT 325137
Query 349787 GGTGGTGGTACTTTTGATGTATCACTAC-TAACACTTGAAGAGGGAATTTTTGAAGTTAA 349845
|| |||||||| |||||||| || || | ||||| || | | || | ||| || ||
Sbjct 325138 GGCGGTGGTACCTTTGATGTCTCTCTGCTTAACA-TTCAGGGCGGTGTCTTTACTGTCAA 325196
Query 349846 AGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAA 349890
|| ||||| ||||| || || || ||||| | || || |||||
Sbjct 325197 GGCCACTGCCGGTGACACGCACCTGGGTGGCCAGGACTTCGATAA 325241
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515243178594134
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