Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20yeast- like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq69 405 6e-108 seq24 84.2 2e-11 >seq69 Length=174959 Score = 405 bits (448), Expect = 6e-108 Identities = 1147/1740 (66%), Gaps = 39/1740 (2%) Strand=Plus/Plus Query 78190 GTTCGCAAATAGTACATGCCCG-TCTTGAGACCCTTCTTCCATCC-GTACAGGTGCATAC 78247 || |||| ||||||||||| | | ||||| ||| |||||| || ||| | ||||| | Sbjct 171934 GTACGCAGGTAGTACATGCCGGGTTTTGAGCCCCAGCTTCCAACCAGTAAAA-TGCATGC 171992 Query 78248 TCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGA 78307 | | | ||| ||| ||||| | |||| ||||||||||||||||||||||||| Sbjct 171993 TGGTGATTTTGCCCATCGACGGGTCTTTCATGTGAATGTTGAGCGACTGGGACTGGTCGA 172052 Query 78308 TGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGG 78367 | | ||||| |||||||||||||| | | ||| |||| ||||||||||| || Sbjct 172053 TAAAAGCACCCCGGTCGGCCGCCATCTGCACCACCTGTCGCTGCGAAATCTCCCAGACGG 172112 Query 78368 TCCGGTAAATGGCCTTCAGCTCTTCCTGGATGTCCAGC--GCT-TGTACGCTCCCACCGG 78424 || ||||| || || | || | |||||| | | | |||| | ||| | Sbjct 172113 TCTTGTAAAGTGCTTTGACGTCGGCGGGGATGTTGGGGATGTTCTGTATGGACCC---GT 172169 Query 78425 CTCGCACAAT--TTCA-TTCTTAATTTGAGGGTTCCAGCGATTGATCTTCT-GA--AGAT 78478 | | |||| ||| ||||| || | || | | | | | | || |||| Sbjct 172170 TTTCCGCAATGATTCGGTTCTTCATC---GCGTCCGACCATAAGCCCAAGTCGACCAGAT 172226 Query 78479 CCCGGACCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGA 78538 || || ||| |||| | || ||||||||| ||||| || ||| |||||| Sbjct 172227 CCTTGAGCAGCCAGGGGTTGACCACCTGGAACTCGCCCGCCAGTACGCGTCGCTGGTAGA 172286 Query 78539 TGTTGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGG 78598 |||||| |||||| |||||||| ||||||||| || | ||| || | || ||| | Sbjct 172287 TGTTGGACGTGTAAGGCTCGAAGCACTCGTTGTTGCCAAGGATTTGCGACGTGCTGGCCG 172346 Query 78599 TCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTC------GA 78652 ||||||| || || ||||| ||| || || | |||| | |||||||| || Sbjct 172347 TCGGCATAGGGGCCACCAGCAGACTGTTGCGTATGCCATACTCCTTGATCTGCTCCCGGA 172406 Query 78653 CCTTTAGGCCGTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGATAC 78712 | || | ||||| | || | | | | |||||| || || || | | Sbjct 172407 GCGTTTCCCACTCCCAGAGCTCTGAAGGCTTCACCTTCCACATATCAAACTGGAGCACGC 172466 Query 78713 CCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGC 78772 |||| ||||| ||||| || || |||| | ||| | || || ||| || || || Sbjct 172467 CCTCCGACGCAGGCGATCCTTTAAACGACGAGTAGGGCCCTTCGCTCTTTGCCAGCTCCA 172526 Query 78773 ATGACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCG 78832 ||| | || || |||||||| | | |||||| || || ||| ||||| || | Sbjct 172527 TTGAGGCAGTCAACGCGGCGTGGTAGATGGTCTCGAATATTTTCTGGTTTAGCTCCCGGG 172586 Query 78833 CCTTGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGC 78892 ||| | || |||| | || ||| || || |||| |||||||||||||| | Sbjct 172587 CCTCCGGAGACTCAAACGGCATGCGGAGAGCCAGAAAAGCATCAGCCAGGCCCTGGACAC 172646 Query 78893 CGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTAAAAGT 78952 | | | | ||||||||||||||||||||||| ||| ||||| | || |||||| || Sbjct 172647 CAACACCAATCGGTCGGTGGCGCATGTTGCTGTTTTGGGCCTCTTCAACTGGGTAATGGT 172706 Query 78953 TCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTTGG 79012 | ||||||| | || |||||||| ||||||| | |||||||||| | || Sbjct 172707 TGACGTCGATGATCCTATTGAGGTTACGGACGACGACCTGCGTCACCTCGTGGAGCTTCT 172766 Query 79013 CGAAATCAAAA------TGATTTCCTTTGATGAAAGTCGGTAGGCACAGCGATGCCAGGT 79066 ||| || | || | | || ||| | || ||| ||||| ||||| | Sbjct 172767 GGAAGTCGTAGCAGCCCTGGTCATAGTCGACGAAGGCAGGCAGGGCTAGCGAGGCCAGAT 172826 Query 79067 TGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACG 79126 |||| || || || || || ||| ||| | |||||| ||||| | || || Sbjct 172827 TGCAGACAGCAACTTCATCAGGTGCAGAGTACTCAACGATTTCCGTGCAAAGGTTCGAAC 172886 Query 79127 ACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACA 79186 | |||||||| | |||||| || |||||||| ||| || |||||||| || Sbjct 172887 TCCGAATGGTGCCCAGGTTCTTTTGATTGCTCTTGCGGTTGCAATGATCCTTGTACAGCA 172946 Query 79187 TGTACGGCGTCCCGGTCTCAACCTG-ACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCC 79245 || |||| | || || || ||| ||| | || | | ||| | | | | ||| Sbjct 172947 TGAACGGGTTGCCCGTTTCCGTCTGTACT-TCCAGGATAGAATACCACAGCTTCTGAGCC 173005 Query 79246 CGGACAACCTTCTTGTACCGACCCTGTGCGA-CGTACGTCCGGTACAACTCGTTGAAAGC 79304 || || ||| | || |||| ||| ||||| | ||||| | | || | Sbjct 173006 CGCACCGTCTTGCGGCCACGGCCCTC-GCGCTCGTACTTTTCGTACAGAGCCTCAAATTC 173064 Query 79305 CTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTC 79364 || || ||| |||| ||| || || || |||| |||||||| || ||| || | Sbjct 173065 ATCGCCGTAGCAGTCGGCCAGACCGGGACATTCGTTGGGGCACATGAGCGTCCAATCACC 173124 Query 79365 GTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCG 79424 || ||||| || || |||||| ||||| || ||||||||||| |||||||||||| Sbjct 173125 GTTTTTCTCCACGCGCTTCATGAACAGGTCGGGAATCCACAGGGCTAAGAAGAGGTCGCG 173184 Query 79425 GCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGC 79484 || | |||||| | ||| |||||| |||| || ||||| || | || || || Sbjct 173185 AGCTCGAACCTCCTCCTTGCCATGGTTCTTGCGCAAATCCAGAAACTCAAAGACATCAGC 173244 Query 79485 GTGCCA-CGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGA 79543 ||||| |||||||| || ||||| || | ||| |||||| ||||||||||| || Sbjct 173245 ATGCCATTGGCTCCAGGTATATGGCAAAGGCACCTGGCCGCTTGTTGCCGCCCTGGTCGA 173304 Query 79544 CGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGT 79603 |||| |||||||||||||| || || || |||||||| | || |||| | | |||| Sbjct 173305 CGTAGCGGGCCGTGTTGTTAAAGACACGAAGCATGGGAATGACACCGTTCGAGGTCCCGT 173364 Query 79604 TCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGA-GCA-GTGGATTCCGATGCC 79661 | || ||| || | | ||| | || || | | ||| ||| || || |||||||| Sbjct 173365 TGGTGCCGGCAATGCAAGAGCCGGTAGCACGGA--TCCGATGCACGTTGAGCCCGATGCC 173422 Query 79662 CCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGA 79721 |||| | ||| ||||| |||||| ||||||||| ||||| ||||||||||| Sbjct 173423 ACCGGCCATCTTAGAGATCATGGCGCACGTCTTGAGCGTGTCGTAAATGCCCTCGATGCT 173482 Query 79722 GTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTT 79781 ||| |||||||| | || |||||||| |||| || | ||| || ||||| Sbjct 173483 GTCATCCTTCATGTCAACGAGGAAGCACGAGGACAGTTGGCACTGAGGCGTGCCAGCGTT 173542 Query 79782 GAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTT 79841 ||| || | ||||| ||| || ||||||| ||| | ||| || | |||||| || Sbjct 173543 GAACAGCGCCGGCGACGCATGGGTGAAGAGCTTGCTGGACATGAGGTTGTACGTTTCGAG 173602 Query 79842 GACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTGGGG 79901 ||| || || | |||||| || || || || |||||||||| | || ||||| Sbjct 173603 GACTCGGTCGATATTGTCGCCCCATATACCCACGGCAACGCGCATGATCATGTGTTGGGG 173662 Score = 390 bits (432), Expect = 1e-103 Identities = 1148/1736 (66%), Gaps = 45/1736 (3%) Strand=Plus/Minus Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACG 19175 ||||||| || || || || || |||||| | || ||||||| ||| || ||| Sbjct 173649 TCATGCGCGTTGCCGTGGGTATATGGGGCGACAATATCGACCGAGTCCTCGAAACGTACA 173590 Query 19176 ACCTGATGAGCCAG-AAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACG 19234 |||| ||| |||| ||| ||||||| || ||| ||||| | || |||||||| || ||| Sbjct 173589 ACCTCATGT-CCAGCAAGCTCTTCACCCATGCGTCGCCGGCGCTGTTCAACGCTGGCACG 173531 Query 19235 AACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGC 19294 | || |||| || ||||| || | ||||||||||||||||| |||||| Sbjct 173530 CCTCAGTGCCAACTGTCCTCGTGCTTCCTCGTTGACATGAAGGATGACAGCATCGAGGGC 173471 Query 19295 ATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATC 19354 || ||||| ||||||||| |||||| ||||| ||| | |||| || |||||| || Sbjct 173470 ATTTACGACACGCTCAAGACGTGCGCCATGATCTCTAAGATGGCCGGTGGCATCGGGCTC 173411 Query 19355 CAC-TGC-TCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCG 19412 || ||| ||| || ||| | | || | | || || || ||||| | Sbjct 173410 AACGTGCATCGGAT--CCGTGCTACCGGCTCTTGCATTGCCGGCACCAACGGGACCTCGA 173353 Query 19413 ACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGG 19472 ||||| || | || ||||| || ||||| |||||||||||| | |||||| ||||||| | Sbjct 173352 ACGGTGTCATTCCCATGCTTCGTGTCTTTAACAACACGGCCCGCTACGTCGACCAGGGCG 173293 Query 19473 GCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCA-TGGCACGCGGACGTCATG 19531 || ||| || || | || ||||| ||||| |||||| ||||| || || ||| | Sbjct 173292 GCAACAAGCGGCCAGGTGCCTTTGCCATATACCTGGAGCCAATGGCATGCTGATGTCTTT 173233 Query 19532 GATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTC 19591 || || || || ||||| |||||| || | |||||| | || ||||||||||||| Sbjct 173232 GAGTTTCTGGATTTGCGCAAGAACCATGGCAAGGAGGAGGTTCGAGCTCGCGACCTCTTC 173173 Query 19592 ACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCAC 19651 ||| |||||||||| ||||| |||||| || || ||||| ||| || ||| Sbjct 173172 TTAGCCCTGTGGATTCCCGACCTGTTCATGAAGCGCGTGGAGAAAAACGGTGATTGGACG 173113 Query 19652 CTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAG 19711 || |||||||| ||||||| || || || ||||| ||||||||| | || | | Sbjct 173112 CTCATGTGCCCCAACGAATGTCCCGGTCTGGCCGACTGCTACGGCGATGAATTTGAGGCT 173053 Query 19712 TTGTACCGGACTTACGTAGC-CCAGGGCCGGTTCAAGAAGGTGGTCCGGGCCCGGGACGT 19770 ||||| | |||| ||| | ||||||| | ||| ||| ||||| | | | | Sbjct 173052 CTGTACGAAAAGTACG-AGCGCGAGGGCCGTGGCCGCAAGACGGTGCGGGCTCAGAAGCT 172994 Query 19771 CTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGA 19830 ||| | |||| || ||| || || |||| |||| |||| |||||||| Sbjct 172993 GTGGTATTCTATCCTGGAAGTACAGACGGAAACGGGCAACCCGTTCATGCTGTACAAGGA 172934 Query 19831 -CGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTGT 19889 | || ||| |||| ||||| |||||| | ||| | || | || ||||| | Sbjct 172933 TCATTGC-AACCGCAAGAGCAATCAAAAGAACCTGGGCACCATTCGGAGTTCGAACCTTT 172875 Query 19890 GTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCCC 19949 | || |||||| | ||| || || || || ||| || || |||||||| || | Sbjct 172874 GCACGGAAATCGTTGAGTACTCTGCACCTGATGAAGTTGCTGTCTGCAATCTGGCCTCGC 172815 Query 19950 TGTGCCTGCCGACTTTCGTC----AAGGCC--TCCTCCTTCGACTTTGCCAAATTGTACG 20003 | |||||| | |||||| | | || || || |||||| || | ||| Sbjct 172814 TAGCCCTGCCTGCCTTCGTCGACTATGACCAGGGCTGCTACGACTTCCAGAAGCTCCACG 172755 Query 20004 AGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACCCGA 20063 ||||||| | ||||||| ||||| || ||| | ||||||| ||| |||||| Sbjct 172754 AGGTGACGCAGGTCGTCGTCCGTAACCTCAATAGGATCATCGACGTCAACCATTACCCAG 172695 Query 20064 CCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGCC 20123 || | ||| | || || ||||||||||| ||||| | | || |||||||||| Sbjct 172694 TTGAAGAGGCCCAAAACAGCAACATGCGCCACCGACCGATTGGTGTTGGTGTCCAGGGCC 172635 Query 20124 TGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGACGATCCCAAGGCGCGCGAGCTCA 20183 |||| || | ||| || ||| || | | || || ||| |||| || ||||| | Sbjct 172634 TGGCTGATGCTTTTCTGGCTCTCCGCATGCCGTTTGAGTCTCCGGAGGCCCGGGAGCTAA 172575 Query 20184 ACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGCGAACTCGCCA 20243 || || || |||||| || | |||||||| || | | || || || | || Sbjct 172574 ACCAGAAAATATTCGAGACCATCTACCACGCCGCGTTGACTGCCTCAATGGAGCT-GGCA 172516 Query 20244 AAGAG-GACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGTATCCTCCAG 20302 ||||| || || || ||| | |||| || || ||||| ||||| ||||| | |||||| Sbjct 172515 AAGAGCGAAGGGCCCTACTCGTCGTTTAAAGGATCGCCTGCGTCGGAGGGCGTGCTCCAG 172456 Query 20303 CCGGACATGTGGGGCGTCACTGAGAAT---GAG-TTTTGGAGCG-----CCCTCAAGGTT 20353 || |||||| || | || | ||| | | |||| | | ||| || Sbjct 172455 TTTGATATGTGGAAGGTGA---AGCCTTCAGAGCTCTGGGAGTGGGAAACGCTCCGGGAG 172399 Query 20354 GAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGACCGCCTCG 20413 |||||||| | || | |||||| |||| || || || |||||||| ||| Sbjct 172398 CAGATCAAGGAGTATGGCATACGCAACAGTCTGCTGGTGGCCCCTATGCCGACGGCCAGC 172339 Query 20414 ACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGACCAACATCTACTTG 20473 || | || ||| | || ||||||||| |||||||| |||||| ||||||||||| | Sbjct 172338 ACGTCGCAAATCCTTGGCAACAACGAGTGCTTCGAGCCTTACACGTCCAACATCTACCAG 172279 Query 20474 CGTCGTACACTGGCCGGTGAGTTCGTCATGGTAAACAAGCACCTGGTCCGCGACTTGCAG 20533 || || |||||| || |||||| |||| ||| ||| || || || Sbjct 172278 CGACGCGTACTGGCGGGCGAGTTCCAGGTGGTCAACCCCTGGCTGCTCAAGGATCTGGTC 172219 Query 20534 AAGATCGATATGTGGTCGCCCAAAATTAAGAA-TGAA--ATTGTCCGAGCCGGCGGGAGC 20590 | | | | |||||| | || ||||| ||| |||| || | |||| | Sbjct 172218 GACTTGGGCTTATGGTCGGACGCGATGAAGAACCGAATCATTG--CG-GAAAACGGGTCC 172162 Query 20591 GTCCAG-GCAT--TGGATATCCCCCAGAACCTCAAGGACATTTACAGGACCGTATGGGAA 20647 | ||| ||| | |||||| || |||| | |||||| |||||| ||||| Sbjct 172161 ATACAGAACATCCCCAACATCCCCGCCGACGTCAAAGCACTTTACAAGACCGTCTGGGAG 172102 Query 20648 ATCCCACAG-AAGAGCATCATCGACATGGCGGCCGATCGCGGCGCCTACATCGACCAGTC 20706 || | ||| | || | | | ||||||||||| || || || | ||||||||||| Sbjct 172101 ATTTCGCAGCGACAG-GTGGTGCAGATGGCGGCCGACCGGGGTGCTTTTATCGACCAGTC 172043 Query 20707 CCAGTCGCTCAATGTCTTCATGGAGAATCCGAGCCTGGCGAAGCTGAGCTCCATGCATAT 20766 |||||||||||| | |||| | | ||| ||| || | | | ||||||| | Sbjct 172042 CCAGTCGCTCAACATTCACATGAAAGACCCGTCGATGGGCAAAATCACCAGCATGCAT-T 171984 Query 20767 GTAC-GGCTGGCACAAGGGGCTCAAGA-CGGGCATGTACTATCTGCGGACCCGAGC 20820 ||| || ||| | ||||||||| | | ||||||||||| ||||| || | ||| Sbjct 171983 TTACTGGTTGGAAGCTGGGGCTCAAAACCCGGCATGTACTACCTGCGTACGCAAGC 171928 >seq24 Length=328731 Score = 84.2 bits (92), Expect = 2e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 59968 CATCATTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCT 60027 |||| ||||| ||||| | | || ||||| || || || |||||||| ||| Sbjct 173630 CATCGTTTGCTCAACGCTTGGTGGCCTTTGCCGCGGTCGAGGGTATCTTCTTTAGTGGTG 173689 Query 60028 CGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCA 60087 | || | || ||||||||||| ||||||||||||||||| ||| ||| || |||| Sbjct 173690 CCTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCTTGACCTTTTCCA 173749 Query 60088 ACGAGCTGATTTCCCGGGACGAGGGCCTCCATCAGGAGTTTGCA 60131 |||| || ||||| || || || || | || ||| |||||| Sbjct 173750 ACGAACTCATTTCGCGAGATGAAGGTTTGCACACGGACTTTGCA 173793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548520836908320