Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq53 102 7e-17
>seq53
Length=178968
Score = 102 bits (112), Expect = 7e-17
Identities = 276/410 (67%), Gaps = 28/410 (7%)
Strand=Plus/Minus
Query 30061 CACGTAAAACTGA-CA--CATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTT 30117
|||||| |||||| || |||| ||||| || || | |||||||| |||||| ||
Sbjct 126443 CACGTAGAACTGAGCAAGCATG---TGGCAGGGCGGCAAAGCCATGATCTTCAAGTCCTT 126387
Query 30118 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGA---TGAGGTC 30174
||||||||| || ||| ||||||||||| ||| | || |||||| | || ||
Sbjct 126386 GGGGTTCCATGCAGACAAGATGATGCGCCGGTCGTACGGCATGTTCCGCAACTTGTGGAT 126327
Query 30175 CACGGCGTTTTGC-AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGT 30233
||| || || ||||| || || ||| | | |||||| ||| | ||| ||
Sbjct 126326 GACGTCG----GCAAGCTGGTCGACGCCCTGGTCGGTGTAGTCGGCCTTGGCATCCACGT 126271
Query 30234 ACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCC 30293
||| ||||| ||||||| |||||| || || || || ||||||||||| || | || |
Sbjct 126270 ACTGAGCTCCAAAATGCCGCCACTGAAAGCCATATACGGGTCCCAGGTCACCGACCTCGC 126211
Query 30294 TGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTA 30353
||| || || |||| | || || | || |||||| | ||||| ||||| |
Sbjct 126210 GATGCGAGAGACCGACGCTGTCAAGGAACTCGCGAGAGCCGTTGCCATCCCAAATCTTGA 126151
Query 30354 CCCC--CTT--CTCAGAG--AGCTCTTTGGAG-TTTGTGGACCCTCTGACGAACCACAGC 30406
| || | | ||||| | ||| | || ||| | ||||| || |||||| |||
Sbjct 126150 CGCCTGCGTCGCTCAGCGCAAGC-----GAAGACGTGTTG-CCCTC-GATGAACCAAAGC 126098
Query 30407 AGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456
| ||| | | ||||||||| ||||| | ||| || || || || ||
Sbjct 126097 AACTCGGCAATGACGGCCTTGAGGAAGACGCGCTTCGTTGTAAGAAGCGG 126048
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406307537797176
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |