Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq12 102 7e-17
>seq12
Length=470578
Score = 102 bits (112), Expect = 7e-17
Identities = 146/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 27012 ACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAA 27071
|| || ||| | || || || || || || | || || | ||||| | |||||
Sbjct 223681 ACTGGAAAGACGATCACCCTAGAGGTAGAGTCCTCTAACACTATTGATAACGTCAAGTCC 223740
Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131
|| || || ||||| || || || || ||||||||||| || || || | ||||| |||
Sbjct 223741 AAGATCCAGGACAAGGAGGGTATTCCTCCCGATCAACAACGCTTGATCTTTGCCGGAAAA 223800
Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191
|| ||||| || | |||| | ||||| ||||||||||| |||||||| || |||||
Sbjct 223801 CAGTTGGAGGATGGCAGGACCTTGTCCGACTACAACATTCAGAAGGAGTCTACACTACAT 223860
Query 27192 TTGGTTTTGCGTTTGCGGGGTGGCAT 27217
| || |||| ||||| || || ||
Sbjct 223861 CTTGTCCTGCGCTTGCGCGGCGGTAT 223886
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || || | || |||||| | || ||| | ||||| ||| |||||
Sbjct 223885 ATGCAAATCTTTGTGAAGACATTAACTGGCAAGACGATCACTTTGGAAGTCGAATCGTCC 223944
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || || ||||| || ||||| || || || || || ||||||
Sbjct 223945 GACACCATCGATAATGTGAAGTCGAAAATCCAGGACAAGGAGGGTATTCCCCCTGATCAA 224004
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | || ||||| || | || || | || | ||||||||||||
Sbjct 224005 CAGCGCCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGAACTCTGTCCGATTACAAC 224064
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || || ||||| || || || | || | |||||||| || || ||
Sbjct 224065 ATCCAGAAAGAGTCCACGTTGCACCTTGTCCTTCGTTTGCGCGGCGGTAT 224114
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434915257714560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |