Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20yeast- like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq12 84.2 2e-11 >seq12 Length=470578 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||| || || || ||| | || || || ||||| | || || ||| | Sbjct 224113 ATGCAAATATTCGTCAAGACTTTGACGGGAAAGACGATTACTTTGGAAGTTGAATCTTCG 224172 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || |||| ||||| || || |||||| ||||| ||||| |||| || | Sbjct 224173 GATACGATTGACAAT--GTGAAGTCGAAAATACAAGACAAGGAAGGCATTCCCCCCGACC 224230 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | || || | || ||||||||||||||| |||| || | ||| | || |||||||| Sbjct 224231 AACAGCGCCTCATATTTGCCGGAAAACAACTGGAAGATGGACGTACTCTGAGCGATTACA 224290 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 | || || ||||| ||||||||||| | || ||||| | ||||| || Sbjct 224291 ATATTCAGAAAGAAAGCACTTTGCACCTTGTGCTGCGTCTTCGTGGTGG 224339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355859893171806