Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq12 84.2 2e-11
>seq12
Length=470578
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||| || || || ||| | || || || ||||| | || || ||| |
Sbjct 224113 ATGCAAATATTCGTCAAGACTTTGACGGGAAAGACGATTACTTTGGAAGTTGAATCTTCG 224172
Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
|| |||| ||||| || || |||||| ||||| ||||| |||| || |
Sbjct 224173 GATACGATTGACAAT--GTGAAGTCGAAAATACAAGACAAGGAAGGCATTCCCCCCGACC 224230
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
| || || | || ||||||||||||||| |||| || | ||| | || ||||||||
Sbjct 224231 AACAGCGCCTCATATTTGCCGGAAAACAACTGGAAGATGGACGTACTCTGAGCGATTACA 224290
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
| || || ||||| ||||||||||| | || ||||| | ||||| ||
Sbjct 224291 ATATTCAGAAAGAAAGCACTTTGCACCTTGTGCTGCGTCTTCGTGGTGG 224339
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355859893171806
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |