Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq70 105 6e-18
seq12 91.5 1e-13
>seq70
Length=137430
Score = 105 bits (116), Expect = 6e-18
Identities = 149/207 (72%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141
|| || |||||||| || ||||| ||||| ||| || ||||| | || || |||||
Sbjct 82955 TGCAGAGTGCTCTCCTTCTGTATGTTATAGTCGCTCAGGGTTCGGCCATCTTCGAGCTGC 82896
Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201
|| || ||||| || || ||||||||||||| ||| | || ||| |||||| || ||
Sbjct 82895 TTTCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTG 82836
Query 39202 TGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260
|||| ||| | | | || || |||||||| || | ||||| | || || ||
Sbjct 82835 GACTTGA-CGTTGTCGATGGTGTCAGAAGACTCCACCTCAAGAGTGATTGTCTTCCCTGT 82777
Query 39261 CAGCGTTTTAACAAAGATTTGCATCTT 39287
|| ||||| |||||||| ||||||||
Sbjct 82776 GAGGGTTTTGACAAAGATCTGCATCTT 82750
>seq12
Length=470578
Score = 91.5 bits (100), Expect = 1e-13
Identities = 139/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 39087 CGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCC 39146
|||| |||||| || || || ||||||| || ||||| | || |||||||| |||||
Sbjct 224082 CGTGGACTCTTTCTGGATGTTGTAATCGGACAGAGTTCGGCCATCCTCAAGCTGCTTGCC 224023
Query 39147 CGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTT 39206
||||| || || ||||| || || | ||| | | ||| |||||| ||||||| ||
Sbjct 224022 AGCAAAGATCAGGCGCTGTTGATCAGGGGGAATACCCTCCTTGTCCTGGATTTTCGACTT 223963
Query 39207 GAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGT 39266
| | | | || ||| ||| || || |||| ||||| | || || || | ||
Sbjct 223962 CACATTATCGATGGTGTCGGACGATTCGACTTCCAAAGTGATCGTCTTGCCAGTTAATGT 223903
Query 39267 TTTAACAAAGATTTGCAT 39284
|| ||||||||||||||
Sbjct 223902 CTTCACAAAGATTTGCAT 223885
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429542574119714
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |