Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq12 176 1e-38
seq70 120 7e-22
seq14 114 3e-20
seq69 95.1 3e-14
>seq12
Length=470578
Score = 176 bits (194), Expect = 1e-38
Identities = 166/212 (78%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||||||||| | ||||| ||||| |||| |||||||||| || ||||| |||||
Sbjct 224096 AGGACAAGGTGCAACGTGGACTCTTTCTGGATGTTGTAATCGGACAGAGTTCGGCCATCC 224037
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||| ||||| || || ||||| || || |||||||| ||||||||
Sbjct 224036 TCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGATCAGGGGGAATACCCTCCTTGTCC 223977
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
||||| || ||||||| ||||||||||| || | ||| || || || |||||||||
Sbjct 223976 TGGATTTTCGACTTCACATTATCGATGGTGTCGGACGATTCGACTTCCAAAGTGATCGTC 223917
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || || || || | || | ||||||
Sbjct 223916 TTGCCAGTTAATGTCTTCACAAAGATTTGCAT 223885
Score = 161 bits (178), Expect = 2e-34
Identities = 169/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | ||| |||||||| | |||| |||||| || | |||||||||| || |||
Sbjct 224334 ACGAAGACGCAGCACAAGGTGCAAAGTGCTTTCTTTCTGAATATTGTAATCGCTCAGAGT 224275
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| |||||||| || || || || || || || || || ||||||||||| ||||| ||
Sbjct 224274 ACGTCCATCTTCCAGTTGTTTTCCGGCAAATATGAGGCGCTGTTGGTCGGGGGGAATGCC 224215
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||||||| || || ||||||| || || || || || | ||| || || ||
Sbjct 224214 TTCCTTGTCTTGTATTTTCGACTTCACATTGTCAATCGTATCCGAAGATTCAACTTCCAA 224155
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| |||||||| ||||||||||| || | ||| | ||||||
Sbjct 224154 AGTAATCGTCTTTCCCGTCAAAGTCTTGACGAATATTTGCAT 224113
Score = 120 bits (132), Expect = 7e-22
Identities = 140/189 (74%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
||||||||| || || || || || || || | ||||| |||| ||| || || |||||
Sbjct 223869 CAGGACAAGATGTAGTGTAGACTCCTTCTGAATGTTGTAGTCGGACAAGGTCCTGCCATC 223810
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
|| | ||| || || || ||||| | |||||||| ||||| |||||||| ||||||||
Sbjct 223809 CTCCAACTGTTTTCCGGCAAAGATCAAGCGTTGTTGATCGGGAGGAATACCCTCCTTGTC 223750
Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
|||||||| ||| || || || |||| |||| || || |||| ||||||||
Sbjct 223749 CTGGATCTTGGACTTGACGTTATCAATAGTGTTAGAGGACTCTACCTCTAGGGTGATCGT 223690
Query 225681 CTTGCCCGT 225689
||| || ||
Sbjct 223689 CTTTCCAGT 223681
>seq70
Length=137430
Score = 120 bits (132), Expect = 7e-22
Identities = 161/224 (72%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
|| || | |||||| ||||| |||||| || || || | || || ||| || |||
Sbjct 82973 CGCAGGCGCAGGACGAGGTGCAGAGTGCTCTCCTTCTGTATGTTATAGTCGCTCAGGGTT 82914
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| |||||||| |||||||| || || ||||| || || || |||||||| ||||| ||
Sbjct 82913 CGGCCATCTTCGAGCTGCTTTCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGGAATGCCC 82854
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
|||||||| || ||||| ||| || ||||||||||| || | ||||| || |
Sbjct 82853 TCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTCCACCTCAAGA 82794
Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| ||||| || || | ||||| | || | ||||| ||
Sbjct 82793 GTGATTGTCTTCCCTGTGAGGGTTTTGACAAAGATCTGCATCTT 82750
>seq14
Length=772799
Score = 114 bits (126), Expect = 3e-20
Identities = 126/165 (76%), Gaps = 2/165 (1%)
Strand=Plus/Plus
Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585
||||||| |||||||||| || |||| |||||||| |||||||| || ||||||||
Sbjct 69850 TTTTGGATGTTGTAATCGGACAGGGTTCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATC 69909
Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCT-TC 225644
||||||||||| || || |||||| | ||||| || || ||| || | || | || | ||
Sbjct 69910 AGTCGTTGTTGATCCGGAGGAATAACCTCCTTATCCTGAATC-TTGGATTTAAAGTTATC 69968
Query 225645 GATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
||| || || || | || || || | ||||| || ||||||||
Sbjct 69969 GATCGTTTCCGACGACTCGACCTCGAGGGTGATGGTTTTGCCCGT 70013
>seq69
Length=174959
Score = 95.1 bits (104), Expect = 3e-14
Identities = 112/152 (74%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 193620 CCTTCCCTCTCGTACTTTTCGTACAGTTCCTCAAAATCTTGTCCGTAGATTTCGTCGAGA 193679
|| || | |||||||||||||||||| ||||||| || | |||||| ||| | |||
Sbjct 173027 CCCTCGCGCTCGTACTTTTCGTACAGAGCCTCAAATTCATCGCCGTAGCAGTCGGCCAGA 173086
Query 193680 CCGGGAGCTTCCTTTGGGCAAAAGAGACTCCAATCTCCATCACTTTCCACCCTCTTCATG 193739
|||||| ||| || ||||| | ||| ||||||| || | | ||||| | |||||||
Sbjct 173087 CCGGGACATTCGTTGGGGCACATGAGCGTCCAATCACCGTTTTTCTCCACGCGCTTCATG 173146
Query 193740 AAGAGGTCAGATGTCCAAATGGCGTAGAAAAG 193771
|| ||||| | |||| | ||| |||| ||
Sbjct 173147 AACAGGTCGGGAATCCACAGGGCTAAGAAGAG 173178
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192522368561132
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |