Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20yeast- like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq53 91.5 1e-13 >seq53 Length=178968 Score = 91.5 bits (100), Expect = 1e-13 Identities = 251/380 (66%), Gaps = 10/380 (3%) Strand=Plus/Minus Query 27348 GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGAT 27407 |||||| || || | |||||||| |||||| ||||||||||| || ||| |||||| Sbjct 126422 GTGGCAGGGCGGCAAAGCCATGATCTTCAAGTCCTTGGGGTTCCATGCAGACAAGATGAT 126363 Query 27408 GCGCCTGTCTTCTGGGTTGTTCCTGA---TGAGGTCCACGGCGTTTTGC-AGCTGATCCA 27463 ||||| ||| | || |||||| | || || ||| || || ||||| || | Sbjct 126362 GCGCCGGTCGTACGGCATGTTCCGCAACTTGTGGATGACGTCG----GCAAGCTGGTCGA 126307 Query 27464 CCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATT 27523 | ||| | | |||||| || | ||| ||||| ||||| ||||||| ||| | Sbjct 126306 CGCCCTGGTCGGTGTAGTCGGCCTTGGCATCCACGTACTGAGCTCCAAAATGCCGCCACT 126247 Query 27524 GGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCA 27583 | || || || || ||||||||||| || | || | ||| || || |||| | Sbjct 126246 GAAAGCCATATACGGGTCCCAGGTCACCGACCTCGCGATGCGAGAGACCGACGCTGTCAA 126187 Query 27584 AAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGG 27643 || || | || |||||| | ||||| ||||| || || ||| ||| | | Sbjct 126186 GGAACTCGCGAGAGCCGTTGCCATCCCAAATCTTGACGCCTGCGTCGCTCAGCGCAAGCG 126127 Query 27644 AGTTTGTG-GACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACC 27702 | ||| ||||| || |||||| |||| ||| | | ||||||||| ||||| Sbjct 126126 AAGACGTGTTGCCCTC-GATGAACCAAAGCAACTCGGCAATGACGGCCTTGAGGAAGACG 126068 Query 27703 CTCTTGGTCGTGAGGAGGGG 27722 | ||| || || || || || Sbjct 126067 CGCTTCGTTGTAAGAAGCGG 126048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369504597052718