Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq53 91.5 1e-13
>seq53
Length=178968
Score = 91.5 bits (100), Expect = 1e-13
Identities = 251/380 (66%), Gaps = 10/380 (3%)
Strand=Plus/Minus
Query 27348 GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGAT 27407
|||||| || || | |||||||| |||||| ||||||||||| || ||| ||||||
Sbjct 126422 GTGGCAGGGCGGCAAAGCCATGATCTTCAAGTCCTTGGGGTTCCATGCAGACAAGATGAT 126363
Query 27408 GCGCCTGTCTTCTGGGTTGTTCCTGA---TGAGGTCCACGGCGTTTTGC-AGCTGATCCA 27463
||||| ||| | || |||||| | || || ||| || || ||||| || |
Sbjct 126362 GCGCCGGTCGTACGGCATGTTCCGCAACTTGTGGATGACGTCG----GCAAGCTGGTCGA 126307
Query 27464 CCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATT 27523
| ||| | | |||||| || | ||| ||||| ||||| ||||||| ||| |
Sbjct 126306 CGCCCTGGTCGGTGTAGTCGGCCTTGGCATCCACGTACTGAGCTCCAAAATGCCGCCACT 126247
Query 27524 GGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCA 27583
| || || || || ||||||||||| || | || | ||| || || |||| |
Sbjct 126246 GAAAGCCATATACGGGTCCCAGGTCACCGACCTCGCGATGCGAGAGACCGACGCTGTCAA 126187
Query 27584 AAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGG 27643
|| || | || |||||| | ||||| ||||| || || ||| ||| | |
Sbjct 126186 GGAACTCGCGAGAGCCGTTGCCATCCCAAATCTTGACGCCTGCGTCGCTCAGCGCAAGCG 126127
Query 27644 AGTTTGTG-GACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACC 27702
| ||| ||||| || |||||| |||| ||| | | ||||||||| |||||
Sbjct 126126 AAGACGTGTTGCCCTC-GATGAACCAAAGCAACTCGGCAATGACGGCCTTGAGGAAGACG 126068
Query 27703 CTCTTGGTCGTGAGGAGGGG 27722
| ||| || || || || ||
Sbjct 126067 CGCTTCGTTGTAAGAAGCGG 126048
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369504597052718
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |