Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq69 138 2e-27
seq24 111 2e-19
>seq69
Length=174959
Score = 138 bits (152), Expect = 2e-27
Identities = 405/613 (66%), Gaps = 11/613 (2%)
Strand=Plus/Plus
Query 77760 ATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCA-TGAGTCCTTATAAAGAATAAA 77818
|| |||||||| || | ||| |||||||| ||||| ||| ||||| || || || ||
Sbjct 172892 ATGGTGCCCAGGTTCTTTTGATTGCTCTTGCGGTTGCAATGA-TCCTTGTACAGCATGAA 172950
Query 77819 CGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT-AGCTTTTA 77877
||| | || ||||| ||||| ||| | ||||| | ||| | | ||| ||| |
Sbjct 172951 CGGGTTGCCCGTTTCCGTCTGTACTTCCAGGATAGAATACCACA-GCTTCTGAGCCCGCA 173009
Query 77878 TCATAGATTTGTATCGCCTCTCTCTTTCATA--TTGAGTATATAGCCGTTCAAATTCATC 77935
| | | || | ||| | || || || ||| | |||| |||||||||||
Sbjct 173010 CCGTCTTGCGGCCACGGCCCTCGCGCTCGTACTTTTCGTACAGAGCC--TCAAATTCATC 173067
Query 77936 TCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATC 77995
|| | || ||| || || ||||| || |||||||| | | ||| ||||| |
Sbjct 173068 GCCGTAGCAGTCGGCCAGACCGGGACATTCGTTGGGGCACATGAGCGTCCAATCACCGTT 173127
Query 77996 TTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGT 78055
|| || || || ||||| || || || || ||||| || || | || || || || |
Sbjct 173128 TTTCTCCACGCGCTTCATGAACAGGTCGGGAATCCACAGGGCTAAGAAGAGGTCGCGAGC 173187
Query 78056 TCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATG 78115
|| | || || || || ||||| | ||| |||||||| | | ||||| |||
Sbjct 173188 TCGAACCTCCTCCTTGCCATGGTTCTTGCGCAAATCCAGAAACTCAAAGACATCAGCATG 173247
Query 78116 CCA-TGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATAT 78174
||| ||| || || ||||| || | | || || || || || || ||||| || | |
Sbjct 173248 CCATTGGCTCCAGGTATATGGCAAAGGCACCTGGCCGCTTGTTGCCGCCCTGGTCGACGT 173307
Query 78175 ATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTG 78234
| | ||| ||||| ||| | || | | ||| ||||| | |||||| || || || || |
Sbjct 173308 AGCGGGCCGTGTTGTTAAAGACACGAAGCATGGGAATGACACCGTTCGAGGTCCCGTTGG 173367
Query 78235 TTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTG 78294
| || | ||| || || | || || || | | | | ||| || || || |
Sbjct 173368 TGCCGGCAATGCAAGAGCCGGTAGCACGGATCCGATGCACGTTGAGCCCGATGCCACCGG 173427
Query 78295 CCATCTTAGATATTAGAGCGCAACGT-TTCAATGTATCGTAGATACCCTCTATACTGTCA 78353
|||||||||| || | |||| |||| || | || ||||| || ||||| || ||||||
Sbjct 173428 CCATCTTAGAGATCATGGCGC-ACGTCTTGAGCGTGTCGTAAATGCCCTCGATGCTGTCA 173486
Query 78354 TCCATCATGTTAA 78366
||| |||||| ||
Sbjct 173487 TCCTTCATGTCAA 173499
>seq24
Length=328731
Score = 111 bits (122), Expect = 2e-19
Identities = 179/257 (70%), Gaps = 3/257 (1%)
Strand=Plus/Minus
Query 48438 TCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATC 48497
|||||||| || || || || |||||||||||||| || || | || || | ||||
Sbjct 173429 TCGGAGTGGATGTTCTCCATCATAATCTGAAATCCGTAGAAGCAACGGGCCTCGGGGATC 173370
Query 48498 TGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCA 48557
|| ||||| | || || ||| |||| || ||||| || || || || || ||
Sbjct 173369 TGAACCTCGCCGCTGAACCGCTCAACCAAGTTTTCATTGACGATGCCGTCCGAGGCGGCG 173310
Query 48558 AAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGT---TTATTCCAG 48614
||||| || | | || | |||||| ||||||| | |||| || ||||||
Sbjct 173309 AAAAAGGCCAGGATGTGGGACACAAAATACTTTTCGTCATCATTCAGGCGGTTGTTCCAG 173250
Query 48615 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTT 48674
|||| | || || || | ||||| ||| || |||||||||||||| |||||||| ||
Sbjct 173249 TCATGCAAGTCCTTGGAGAGATCTATTTCCTCGGCTGTCCAAAATGAGGCCTCTGCCTTC 173190
Query 48675 TTATACATATTCCATAT 48691
|| ||||| | ||| ||
Sbjct 173189 TTGTACATTTGCCAAAT 173173
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694663781017920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |