Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20yeast- like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq12 132 3e-26 seq70 107 1e-18 seq14 91.5 1e-13 >seq12 Length=470578 Score = 132 bits (146), Expect = 3e-26 Identities = 158/211 (75%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC--GAGTTGGCGCTCGTCGT 44186 || ||||| | |||| ||| || |||||||||||||||| ||||| | || | || | Sbjct 224093 ACAAGGTGCAACGTGGACTCTTTCTGGATGTTGTAATCGGACAGAGTTCG-GC-CATCCT 224036 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 | |||||||| || |||||||||| ||||| ||||| | || | ||| ||||| ||| Sbjct 224035 CAAGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGATCAGGGGGAATACCCTCCTTGTCCT 223976 Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 || ||| ||||| | | |||||||||| ||||| || |||| || ||||||| Sbjct 223975 GGATTTTCGACTTCACATTATCGATGGTGTCGGACGATTCGACTTCCAAAGTGATCGTCT 223916 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || | |||||||| ||||||||||| Sbjct 223915 TGCCAGTTAATGTCTTCACAAAGATTTGCAT 223885 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184 || ||| ||||| | ||||| || || || || ||||||||| || || | || Sbjct 224325 CAGCACAAGGTGCAAAGTGCTTTCTTTCTGAATATTGTAATCGCTCAGAGTACGTCCATC 224266 Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 ||||| || || |||||||| || | ||||| || || | || | |||||||| || Sbjct 224265 TTCCAGTTGTTTTCCGGCAAATATGAGGCGCTGTTGGTCGGGGGGAATGCCTTCCTTGTC 224206 Query 44245 CGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 ||| ||| ||||| | | || || || | ||||| || |||| |||||||| Sbjct 224205 TTGTATTTTCGACTTCACATTGTCAATCGTATCCGAAGATTCAACTTCCAAAGTAATCGT 224146 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||| | ||||| ||||| |||||||| Sbjct 224145 CTTTCCCGTCAAAGTCTTGACGAATATTTGCAT 224113 Score = 86.0 bits (94), Expect = 5e-12 Identities = 123/171 (72%), Gaps = 2/171 (1%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAA 44204 |||||| || |||||||| |||| | || | || | || |||| ||| || ||||||| Sbjct 223848 CTCCTTCTGAATGTTGTAGTCGGACAAGGTCCTGC-CATCCTCCAACTGTTTTCCGGCAA 223790 Query 44205 AGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG 44264 ||||||| || || ||||| | ||| | ||| ||||| ||| ||||| ||| | Sbjct 223789 AGATCAAGCGTTGTTGATCGGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTGACGT 223730 Query 44265 TTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGA 44315 | | || |||| | ||| || ||||| | || ||||||||||| |||| Sbjct 223729 TATCAATAGTGTTAGAGGACTCTACCTCTAGGGTGATCGTCTTTCCAGTGA 223679 >seq70 Length=137430 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || | ||| | || || ||||| || ||||||||||| || ||||| || ||| Sbjct 82979 CCACCGCGCAGGCGCAGGACGAGGTGCAGAGTGCTCTCCTTCTGTATGTTATAGTCGCTC 82920 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || || | || || |||||||| ||||||||||| | |||||||| || | || Sbjct 82919 AGGGTTCGGCCATCTTCGAGCTGCTTTCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGGA 82860 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | || ||||| ||| ||||| ||| | | | |||||||| | || |||||| Sbjct 82859 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTCCACC 82800 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || | || || ||||| || |||||||| || || ||||| ||||| Sbjct 82799 TCAAGAGTGATTGTCTTCCCTGTGAGGGTTTTGACAAAGATCTGCAT 82753 >seq14 Length=772799 Score = 91.5 bits (100), Expect = 1e-13 Identities = 131/182 (72%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 ||||||||||||||||||||| || || | || || |||||||| ||||| |||| Sbjct 69848 CCTTTTGGATGTTGTAATCGGACAGGGTTCGGCCATCTTCAAGCTGCTTGCCGGCGAAGA 69907 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT- 44266 ||| || || ||||| | ||| | | | ||||| ||| ||||| | || || ||| Sbjct 69908 TCAGTCGTTGTTGATCCGGAGGAATAACCTCCTTATCCTGAATCTT-GGATTTAAAGTTA 69966 Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326 | || || || | || || ||||| | || || || || ||||| |||||||| ||| Sbjct 69967 TCGATCGTTTCCGACGACTCGACCTCGAGGGTGATGGTTTTGCCCGTTAGGGTCTTGACG 70026 Query 44327 AA 44328 || Sbjct 70027 AA 70028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359987864092626