Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq12 132 3e-26
seq70 107 1e-18
seq14 91.5 1e-13
>seq12
Length=470578
Score = 132 bits (146), Expect = 3e-26
Identities = 158/211 (75%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC--GAGTTGGCGCTCGTCGT 44186
|| ||||| | |||| ||| || |||||||||||||||| ||||| | || | || |
Sbjct 224093 ACAAGGTGCAACGTGGACTCTTTCTGGATGTTGTAATCGGACAGAGTTCG-GC-CATCCT 224036
Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246
| |||||||| || |||||||||| ||||| ||||| | || | ||| ||||| |||
Sbjct 224035 CAAGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGATCAGGGGGAATACCCTCCTTGTCCT 223976
Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
|| ||| ||||| | | |||||||||| ||||| || |||| || |||||||
Sbjct 223975 GGATTTTCGACTTCACATTATCGATGGTGTCGGACGATTCGACTTCCAAAGTGATCGTCT 223916
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || || | |||||||| |||||||||||
Sbjct 223915 TGCCAGTTAATGTCTTCACAAAGATTTGCAT 223885
Score = 100 bits (110), Expect = 2e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184
|| ||| ||||| | ||||| || || || || ||||||||| || || | ||
Sbjct 224325 CAGCACAAGGTGCAAAGTGCTTTCTTTCTGAATATTGTAATCGCTCAGAGTACGTCCATC 224266
Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244
||||| || || |||||||| || | ||||| || || | || | |||||||| ||
Sbjct 224265 TTCCAGTTGTTTTCCGGCAAATATGAGGCGCTGTTGGTCGGGGGGAATGCCTTCCTTGTC 224206
Query 44245 CGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304
||| ||| ||||| | | || || || | ||||| || |||| ||||||||
Sbjct 224205 TTGTATTTTCGACTTCACATTGTCAATCGTATCCGAAGATTCAACTTCCAAAGTAATCGT 224146
Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||||| | ||||| ||||| ||||||||
Sbjct 224145 CTTTCCCGTCAAAGTCTTGACGAATATTTGCAT 224113
Score = 86.0 bits (94), Expect = 5e-12
Identities = 123/171 (72%), Gaps = 2/171 (1%)
Strand=Plus/Minus
Query 44146 CTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAA 44204
|||||| || |||||||| |||| | || | || | || |||| ||| || |||||||
Sbjct 223848 CTCCTTCTGAATGTTGTAGTCGGACAAGGTCCTGC-CATCCTCCAACTGTTTTCCGGCAA 223790
Query 44205 AGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG 44264
||||||| || || ||||| | ||| | ||| ||||| ||| ||||| ||| |
Sbjct 223789 AGATCAAGCGTTGTTGATCGGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTGACGT 223730
Query 44265 TTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGA 44315
| | || |||| | ||| || ||||| | || ||||||||||| ||||
Sbjct 223729 TATCAATAGTGTTAGAGGACTCTACCTCTAGGGTGATCGTCTTTCCAGTGA 223679
>seq70
Length=137430
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || | ||| | || || ||||| || ||||||||||| || ||||| || |||
Sbjct 82979 CCACCGCGCAGGCGCAGGACGAGGTGCAGAGTGCTCTCCTTCTGTATGTTATAGTCGCTC 82920
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| || | || || |||||||| ||||||||||| | |||||||| || | ||
Sbjct 82919 AGGGTTCGGCCATCTTCGAGCTGCTTTCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGGA 82860
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290
| || ||||| ||| ||||| ||| | | | |||||||| | || ||||||
Sbjct 82859 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTCCACC 82800
Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| | || || ||||| || |||||||| || || ||||| |||||
Sbjct 82799 TCAAGAGTGATTGTCTTCCCTGTGAGGGTTTTGACAAAGATCTGCAT 82753
>seq14
Length=772799
Score = 91.5 bits (100), Expect = 1e-13
Identities = 131/182 (72%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207
||||||||||||||||||||| || || | || || |||||||| ||||| ||||
Sbjct 69848 CCTTTTGGATGTTGTAATCGGACAGGGTTCGGCCATCTTCAAGCTGCTTGCCGGCGAAGA 69907
Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT- 44266
||| || || ||||| | ||| | | | ||||| ||| ||||| | || || |||
Sbjct 69908 TCAGTCGTTGTTGATCCGGAGGAATAACCTCCTTATCCTGAATCTT-GGATTTAAAGTTA 69966
Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326
| || || || | || || ||||| | || || || || ||||| |||||||| |||
Sbjct 69967 TCGATCGTTTCCGACGACTCGACCTCGAGGGTGATGGTTTTGCCCGTTAGGGTCTTGACG 70026
Query 44327 AA 44328
||
Sbjct 70027 AA 70028
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359987864092626
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |