Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pneumocystis_20jirovecii_20[genbank_20GCA_5F000333975.2_202012-12- 19] 358 sequences; 8,179,983 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq132 98.7 1e-15 >seq132 Length=47203 Score = 98.7 bits (108), Expect = 1e-15 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 146066 AATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCA 146125 ||||| | || | ||| |||||||| ||||| ||||| ||||| ||||| | ||| Sbjct 38631 AATACAAGGTGAAGAGTCGATTCTTTCTGGATATTGTAATCAGAAAGTGTTCTTCCATCC 38690 Query 146126 TCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCT 146185 || || || ||||||||||| || | | ||| |||||||| ||||| |||||||||||| Sbjct 38691 TCCAACTGCTTTCCAGCAAAGATTAGCCGTTGTTGATCCGGTGGAATCCCTTCTTTATCT 38750 Query 146186 TG 146187 || Sbjct 38751 TG 38752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743523072719360