Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pneumocystis_20jirovecii_20[genbank_20GCA_5F000333975.2_202012-12- 19] 358 sequences; 8,179,983 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq220 82.4 8e-11 >seq220 Length=17533 Score = 82.4 bits (90), Expect = 8e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 38320 TTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACG 38379 ||||| ||||| | ||||| ||||| ||||| | ||||||||||| | |||| | Sbjct 2164 TTAAAAGCAAAATTCAAGACAAGGAGGGCATTCCACCGGACCAACAGCGTTTAATTTTTG 2223 Query 38380 CGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGA 38439 | ||||| |||||||| |||| || || || |||||||| ||||| || ||| ||| Sbjct 2224 CCGGCAAGCAGCTGGAAGACGGCCGGACGCTATCTGACTACAATATCCAGAAAGAATCGA 2283 Query 38440 CGCTGCAT 38447 | || ||| Sbjct 2284 CCCTTCAT 2291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500170561726720