Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pneumocystis_20jirovecii_20[genbank_20GCA_5F000333975.2_202012-12- 19] 358 sequences; 8,179,983 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq103 517 4e-141 seq325 132 2e-25 seq78 129 2e-24 seq84 123 1e-22 seq132 109 2e-18 seq195 105 3e-17 seq75 105 3e-17 seq220 102 3e-16 seq189 100 1e-15 seq276 93.3 2e-13 >seq103 Length=78968 Score = 517 bits (572), Expect = 4e-141 Identities = 1082/1594 (68%), Gaps = 35/1594 (2%) Strand=Plus/Minus Query 450914 GCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAAT 450973 ||| |||| |||||| | |||||||| |||||||| || || || | | ||| || Sbjct 75386 GCAGTTGGTATTGATTTAGGAACCACGTTTTCATGCGTGGGAGTATGGATATCAGGACAT 75327 Query 450974 GTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACG 451033 ||||| |||||||| ||||| ||||| ||||| || || |||| ||| ||||| Sbjct 75326 GTAGAGATTATAGCGAATGATCAAGGGAATCGAACCACACCATCATATGTAGCGTTTACA 75267 Query 451034 GATTCAGAAAGACTTTTAGGGCAAGCTGCTAAAT-CAATGGTAAATTCAA---ATGCCAA 451089 ||||||||||||||| | || | || || ||| | | | | | | || |||| Sbjct 75266 GATTCAGAAAGACTTATTGGAGATGCAGCAAAAAACCAGGTTGCAATGAATCCATGC--- 75210 Query 451090 AAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACA 451149 || ||||||| |||||| |||||| | ||||| || | | | ||| || || Sbjct 75209 -AATACAGTATTTGATGCAAAACGTCTGATTGGACGGAAATTCGGGGATCCAGAAGTGCA 75151 Query 451150 AAAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGA-AAGCCCTATATTC 451208 | ||| | ||| | ||| | | || || | |||| | ||||| ||||||| Sbjct 75150 ATCAGATATGAAACATTGGCCTTTTAAAGTTATAGA-CAAAGGTCAGAAGCCTTATATTC 75092 Query 451209 AAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTC 451268 | || | |||||||| || | |||||| ||| | || || || |||||||| ||||| | Sbjct 75091 AGGTTGAATATAAAGGGGATATTAAAACATTTACGCCGGAGGAGATTTCATCAATGGTCC 75032 Query 451269 TTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAA 451328 |||| |||||||| ||| |||||| ||| |||| || |||| | |||| || | Sbjct 75031 TTACAAAAATGAAGGAAGTGGCAGAAGCGTATCTTGGGACTAAAGTTTCCAATGCTGTTA 74972 Query 451329 TTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATA 451388 | || || || || |||||||||||| |||| || || || || ||||| |||||| | Sbjct 74971 TCACGGTCCCAGCATATTTCAATGATTCACAGCGACAGGCTACGAAAGACGCAGGATTGA 74912 Query 451389 TTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATG 451448 |||| || || |||||| | || ||||| ||||||||||||||||| || | ||||||| Sbjct 74911 TTGCAGGATTGAATGTTTTACGTATTATCAATGAACCTACAGCAGCAGCCATTGCATATG 74852 Query 451449 GACTAGGAAAATCAAAAGA-AACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGA 451507 | |||| || | |||| | || | ||||| ||| | | | |||||| |||| ||| Sbjct 74851 GTCTAG----ATAAGAAGACATCAAATGAAAAGAATGTGCTTATTTTTGATCTTGGAGGA 74796 Query 451508 GGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACC 451567 |||||| ||| || || | | || ||||| || | |||||||| || |||||| Sbjct 74795 GGAACTTTTGACGTATCGTTATTAACTATCGAAGAAGGAATTTTTGAAGTCAAAGCAACC 74736 Query 451568 AATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGTGGAATGGTTGAAA 451627 || ||||| ||| | ||||| |||||| |||| ||| |||| | || | Sbjct 74735 GCAGGCGATACCCATTTGGGAGGAGAAGATTTTGACAATCGTCTTGTAAACCACTTCATT 74676 Query 451628 ACTGATGTTCAACGAAAACTAAAAGTAGATATTTCTACTAACCAAAAAGCACTTAGACGT 451687 |||| || |||| |||| || |||| |||| || | | | ||| | || Sbjct 74675 GCTGAATTTAAACGCAAACACAAGAAAGATCTTTCAGGGAATGCACGATCTCTTCGTCGG 74616 Query 451688 CTTAAAACATCAGCAGAAAAAGCTAAAATTACAC--TCA-GTTCAACACAAACTACTAGT 451744 ||| |||| || || |||||| || | ||| |||||||| || ||| Sbjct 74615 CTTCGAACAGCATGTGAGCGTGCTAAACGGACTCTTTCATCATCAACACA---GACGAGT 74559 Query 451745 ATAAACATTGATAGTTTAGTTGATGGAATGGATTATGCTACTACTCTTACCCGTGCTAAA 451804 ||| | |||||| ||| |||| ||||| |||| |||| || |||| |||||| | Sbjct 74558 ATAGAAATTGATTCCTTATTTGAAGGAATTGATTTATATACTTCTATTACTCGTGCTCGA 74499 Query 451805 TTTGAATCAATTTGTTCCAGTATTTTTGCACGGG--TAATGAAACCTGTTGATCAAGTAT 451862 |||||| | ||||| || || ||| | ||| |||| |||| ||||| |||| Sbjct 74498 TTTGAAGAACTTTGT--CAAGATCTTTTTAGGGGAACAATGGAACCAGTTGAGAAAGTTC 74441 Query 451863 TACATGATTCTAAAATTAGTAAAGATAAAATTGATGAAATTGTGCTTGTAGGAGGTTCTA 451922 | | ||||||||||||| |||| | || |||||||||| | || || ||||||| Sbjct 74440 TTCGTGATTCTAAAATTGATAAATCAAGTGTTCATGAAATTGTATTGGTTGGTGGTTCTA 74381 Query 451923 CACGAATTCCTAAAATTCAAGATATGTTGTCTTCTTATTTTGGAGGAAAACAACTATGTA 451982 | || ||||| ||||| | || | | | || |||| |||||| | | | | Sbjct 74380 CGCGTATTCCGCGTATTCAGAAATTGGTTTGTGATTTTTTTAATGGAAAAGAGCCAAAT- 74322 Query 451983 AGAGCG-TAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTA 452041 ||| || | ||||| |||||||||||||| |||||||| ||||||||||| |||||||| Sbjct 74321 AGAACGATCAATCCAGATGAAGCTGTTGCCTATGGTGCGGCAGTTCAAGCTGCTATTCTT 74262 Query 452042 ACAGG-TTCAGATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATC 452100 |||| || || ||| || ||| || || || | ||||| | ||||| || Sbjct 74261 TCAGGAGACACAT-CGGAACAAACTCAAGACATACTCTTGCTTGATGTGGCGCCTCTCTC 74203 Query 452101 TCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTAT 452160 | || ||||||| || || || ||||||| | | |||||||| || || | Sbjct 74202 AATGGGTATTGAAACTGCAGGCGGTGTGATGACAACACTTATTAAACGGAATACAACTGT 74143 Query 452161 TCCTTGTAAAAAGAGTCAAACATTTAGTAC---AGCAAGTGATAACCAACCAGGTGTAAC 452217 || ||||||| || ||| ||| ||| |||||||| || |||||| Sbjct 74142 CCCGACTAAAAAGTCCGAAGTCTTTTCTACTTATGCA---GATAACCAGCCTGGTGTACT 74086 Query 452218 TATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATT 452277 ||| ||||| | |||||| ||||||||| || |||| | ||| ||| |||| Sbjct 74085 TATCCAAGTATATGAAGGCGAACGTGCACGTACCAAAGATTGCCACTTACTTGGACAATT 74026 Query 452278 TACTCTTTCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGA 452337 | | | || |||||| ||| || | || ||||||||||||| |||| | ||| Sbjct 74025 TGATTTAACAGGCATTCCACCTGCACCTCGTGGTGTTCCTCAAATTGAAGTTACTTTTGA 73966 Query 452338 TGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAAATCAGA 452397 ||||||| ||| ||||||||||| ||| ||||| ||| | || ||| || Sbjct 73965 CATTGATGCTAATTCAATTCTTAATGTCTCTGCTGTTGAGAAAGGGACAGGTAAAACAAG 73906 Query 452398 AAAAATTACAATTACTAATGATAAAAACCGTTTATCTAAAGAAGATATTGAAAAAATGGT 452457 || ||||| || | ||||| ||| |||||||| || ||||| ||||| ||| | Sbjct 73905 CAATATTACTATCAAGAATGAAAAAGGTCGTTTATCAAAGGAAGAAATTGAGCGTATGAT 73846 Query 452458 AGATGAAGCAGAAAAATTCAAGGATGATGATGAA 452491 | |||||||| |||| || | ||| |||||| Sbjct 73845 TCAAGAAGCAGAGAAATATAAAGCTGAAGATGAA 73812 >seq325 Length=14064 Score = 132 bits (146), Expect = 2e-25 Identities = 283/418 (68%), Gaps = 5/418 (1%) Strand=Plus/Minus Query 364566 ATTCCATCTTTAGTTGATGGATTTAAACCTTCTCAAAGAAAAATTTTTTATGGAGCAAAT 364625 ||||| ||| |||| ||||| || |||||| || |||||| || | | ||| | Sbjct 11484 ATTCCTTCTGTAGTGGATGGTTTAAAACCTGGACAGAGAAAAGTTATATTTGGGTGTTTT 11425 Query 364626 TTAAGAGGATTAGAAAAAGATCAAGTAAAAGTAGCTCAATTAGCAGGTTTTGTATCTGAC 364685 |||| |||| ||||| | || | ||||| || |||||| |||| | | | ||||| Sbjct 11424 AAAAGAAAATTA--AAAAG-TGAAATTAAAGTTGCACAATTATCAGGATATATTTCTGAG 11368 Query 364686 CGGGTAGCTTATCATCACGGTGAGGCAAGTTTAATGGGAGCAATAATTGGAATGGCACAA 364745 | || |||||||| || ||| |||| | | | | ||||| ||| | |||||| Sbjct 11367 CATACTGCATATCATCATGGAGAGCAAAGTCTTACACAAACGATAATAGGATTAGCACAA 11308 Query 364746 AATTTTGTTGGAAGTAATAATGTAAATTTACTAGAACCAAAAGGACAATTTGGAAGTCGA 364805 | |||||||||||||||||| | ||| | | |||| || || |||||||| | ||| Sbjct 11307 ACATTTGTTGGAAGTAATAATATTAATCTCATGAAACCCAATGGGCAATTTGGTACTCGT 11248 Query 364806 GTAATGGGAGGTAAAGATTCTGCCAGCCCACGTTATATTTGGACCAAACTTGAAAAAGTG 364865 | || || |||||| |||| ||||||||||||| || | | || Sbjct 11247 TTGCAAGGTGGGAAAGATGCTGCATCTCCACGTTATATTTTTACTGAGTTGTCTCCTTTG 11188 Query 364866 GCAGGATTAATATTTAGAAAAGAAGATAATCCAATTTTAAATTATATTAATGATGATGGA 364925 || | ||||||| | || |||| || || | |||||||| ||||||| ||||| Sbjct 11187 ACACGGAAAATATTTGTAGAATCAGATGATGCATTGTTAAATTACCTTAATGAAGATGG- 11129 Query 364926 TTAAT-GGTTGAACCTGAATTTTATCTTCCTATTATTCCTATGATTTTAGTAAATGGA 364982 | ||| | |||||| | ||| ||||||| || ||| | ||| | || |||||| Sbjct 11128 TCAATCTATAGAACCTCTTTGGTATGTTCCTATAATACCTTTAATTCTTGTGAATGGA 11071 >seq78 Length=127363 Score = 129 bits (142), Expect = 2e-24 Identities = 112/139 (81%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 451238 TTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAA 451297 ||| | || ||||||||||| ||||||| ||| |||||||||||||| ||| ||| | Sbjct 120147 TTTACACCGGAAGAAATTTCTGCTATGGTGCTTCGTAAAATGAAAGAAATAGCTGAAGCA 120088 Query 451298 TATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCA 451357 ||| ||||| | ||||| |||| ||| |||| || |||||||||||||||||||| Sbjct 120087 TATCTTGGTCGGACGGTTACCCATGCGGTAGTTACAGTACCCGCTTATTTCAATGATGCG 120028 Query 451358 CAACGGCAAGCAACTAAAG 451376 ||||| |||||||| |||| Sbjct 120027 CAACGTCAAGCAACCAAAG 120009 Score = 87.8 bits (96), Expect = 7e-12 Identities = 160/229 (70%), Gaps = 8/229 (3%) Strand=Plus/Minus Query 451376 GATGCAGG-ACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGC 451434 |||||||| ||| ||||| || || ||||| | |||||| | ||||| || || || || Sbjct 119873 GATGCAGGGACA-ATTGCAGGATTGAATGTATTGCGAATTGTGAATGAGCCAACTGCTGC 119815 Query 451435 TGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATT 451494 || | || ||||| | ||| || ||||| | ||| || ||| | || | Sbjct 119814 CGCAATTGCCTATGGTTT-GGATAAG--AAAGAT---GGTGAACGAATGATTATCGTCTA 119761 Query 451495 TGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGA 451554 || || ||||| || || |||| || |||| || ||||| ||||| || ||||| Sbjct 119760 CGACTTAGGTGGTGGGACATTTGATGTATCGTTACTGTCGATTGAGGATGGCGTCTTTGA 119701 Query 451555 AGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGAT 451603 || | ||||| |||||||||||| |||| ||||||||| ||||| Sbjct 119700 GGTTATTGCAACAGCGGGTGATACTCATTTAGGTGGTGAAGATTTTGAT 119652 >seq84 Length=76631 Score = 123 bits (136), Expect = 1e-22 Identities = 116/144 (81%), Gaps = 3/144 (2%) Strand=Plus/Plus Query 420807 AGTAAATACAACAGTTTTTGTAGGCATATTTACACCAACAGAAAAAGTTTCAGTTGCTAA 420866 |||||| ||||| ||||| | |||||| |||| ||||| |||||| ||||| ||||| || Sbjct 14625 AGTAAAAACAACCGTTTTAGCAGGCATGTTTAGACCAATAGAAAATGTTTCTGTTGCAAA 14684 Query 420867 CAAAACTTTAATTAAttttt-ttGAATAAAGAATTTCAACAATTTCTTTTAAAATAGGAA 420925 | ||||||||| | || ||||| |||| ||||||| | ||||||||||||||| | Sbjct 14685 AAGAACTTTAATAAGGCCTTCTTGAA-AAAGTATTTCAATGACTTCTTTTAAAATAGGTA 14743 Query 420926 TTATACCAGAATGATGATATGCCA 420949 || |||||| |||||| |||||| Sbjct 14744 ATAGACCAGAGTGATGA-ATGCCA 14766 >seq132 Length=47203 Score = 109 bits (120), Expect = 2e-18 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 391062 GTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTGAA 391121 || |||||||| || || ||||| |||||| | || || || || || || | ||||| Sbjct 38830 GTGAAAACACTTACAGGAAAAACGATTACTTTGGAGGTGGAGTCGTCAGACACAATTGAC 38771 Query 391122 GCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATT 391181 | | ||| || ||||||||||| ||||| ||||| || ||||||||||| |||| Sbjct 38770 AATGTCAAAAGCAAGATTCAAGATAAAGAAGGGATTCCACCGGATCAACAACGGCTAATC 38711 Query 391182 TTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGAT 391241 || | || || || | || ||||||||||| | | ||||| ||||| | || || Sbjct 38710 TTTGCTGGAAAGCAGTTGGAGGATGGAAGAACACTTTCTGATTACAATATCCAGAAAGAA 38651 Query 391242 GCAACACTTCACTTAGTATT 391261 | || |||||| | ||||| Sbjct 38650 TCGACTCTTCACCTTGTATT 38631 >seq195 Length=28285 Score = 105 bits (116), Expect = 3e-17 Identities = 155/218 (71%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 501060 TTTGCTTTCTATTTAGAACCTCATCATGCGGATATATTTGATTTTTTGGAACTACGAAAA 501119 |||||| | ||| ||||||| ||||| ||||||||||| || ||||| || || ||| Sbjct 14162 TTTGCTATTTATATAGAACCATGGCATGCAGATATATTTGAATTCTTGGATCTTCGTAAA 14103 Query 501120 AATACTGGTGCCGAATCAGAAA---GAGCCCGTGATTTATTTTTAGCATTATGGGTTTCT 501176 ||| ||| ||| |||| |||| | ||| | |||| | |||||| | || Sbjct 14102 AATCACGGTAAAGAA---GAAATTCGAGCAAGAGATCTTTTTTATGGCTTATGGATACCT 14046 Query 501177 GACTTATTTATGAATCAGGTTAAATTAAATAATGATTGGTATTTATTTTGTCCAGACAAA 501236 |||||||||||||| | || || |||| | |||||| ||||||||||| || || Sbjct 14045 GACTTATTTATGAAACGAGTGGAAGCAAATCAAGATTGGAGCTTATTTTGTCCGAACGAA 13986 Query 501237 GCACCAGGATTAAATGATGTATATGGAGATGAATATGA 501274 || || || || | ||||| || ||||| || | ||| Sbjct 13985 GCCCCTGGTCTAGACGATGTTTACGGAGAAGAGTTTGA 13948 Score = 93.3 bits (102), Expect = 2e-13 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 499665 GAAAGACCTCAAGATGTGTTCATGCGAGTAGCATCTCTTGTACATTGTGGTGATTTACAA 499724 |||||||| ||| || || | ||||| || ||| | | | ||| ||| |||| | || Sbjct 14558 GAAAGACCCCAACATATGATAATGCGTGTTGCAGTTGGTATCCATGGTGATGATGTTGAA 14499 Query 499725 AAAACAATAGATTCATATAATTTAATGTCaaaaaaaTATTTTACTCATGCTAGTCCTACA 499784 ||| | || || |||||||| | ||||| ||||||| | || |||||| |||||| Sbjct 14498 AAAGCTATTGAAACATATAATCTTATGTCTGCAAAATATATGACACATGCTTCACCTACA 14439 Query 499785 TTATTTAATGCAGGAA 499800 |||||||||||||||| Sbjct 14438 TTATTTAATGCAGGAA 14423 >seq75 Length=127942 Score = 105 bits (116), Expect = 3e-17 Identities = 164/230 (71%), Gaps = 11/230 (5%) Strand=Plus/Minus Query 451376 GATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCT 451435 ||||| || ||||||||| |||| |||| || | | ||||||||||| |||||| Sbjct 48595 GATGCCGGCTCTATTGCTGGATTAACCGTTCAGCGTGTAGTAAATGAACCTACTGCAGCT 48536 Query 451436 GCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTT 451495 || || || ||||| || | || |||||||| || ||| | || ||| ||| Sbjct 48535 GCACTTGCTTATGGTCTTG----AT--AAAGAAACGGAT---AAAGTTGTTGCAGTTTTT 48485 Query 451496 GATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAG-ATGGGGTATTTGA 451554 ||| |||| ||||| || ||||| || | || |||| || | || || ||||| Sbjct 48484 GATCTTGGAGGAGGCACATTTGATATATCGATT-TTGGAATTAAATCAAGGTGTTTTTGA 48426 Query 451555 AGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATA 451604 |||||| |||| ||||| ||||| ||||| || || |||||| |||||| Sbjct 48425 AGTAAAATCAACAAATGGCGATACACATCTCGGTGGCGAAGATTTTGATA 48376 >seq220 Length=17533 Score = 102 bits (112), Expect = 3e-16 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 391062 GTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTGAA 391121 || ||||| || || || ||||| || || || || || |||||||| |||| || || Sbjct 2100 GTAAAAACTCTAACAGGAAAAACGATAACACTAGAAGTGGAATCATCAGATACAATCGAC 2159 Query 391122 GCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATT 391181 | ||||| ||||||||||| ||||| || ||||| || || ||||| ||||||||| Sbjct 2160 AATGTTAAAAGCAAAATTCAAGACAAGGAGGGCATTCCACCGGACCAACAGCGTTTAATT 2219 Query 391182 TTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGAT 391241 || | || || || || ||||| || | || | | || || ||||| | || || Sbjct 2220 TTTGCCGGCAAGCAGCTGGAAGACGGCCGGACGCTATCTGACTACAATATCCAGAAAGAA 2279 Query 391242 GCAACACTTCACTTAGTATTA 391262 | || ||||| | |||||| Sbjct 2280 TCGACCCTTCATCTTGTATTA 2300 >seq189 Length=26291 Score = 100 bits (110), Expect = 1e-15 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 451847 CCTGTTGATCAAGTATTACATGATTCTAAAATTAGTAAAGATAAAATTGATGAAATTGTG 451906 |||||||| |||| | | ||||| ||||| |||| |||||||||||| ||||| Sbjct 6797 CCTGTTGAAAAAGTTCTTAAAGATTCAAAAATAGATAAATCTAAAATTGATGATATTGTT 6856 Query 451907 CTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGTCTTCTTATTTTGGA 451966 | || || || || || || ||||| |||||| | | | ||| || ||||| Sbjct 6857 TTGGTTGGTGGATCAACTCGTATTCCACGTATTCAAAAACTCGTTTCTGATTTTTTTGAC 6916 Query 451967 GGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTT 452026 |||||| || ||| | | |||||||| ||| ||||||||||||||| |||||| Sbjct 6917 GGAAAATCTCTTAATAAATCCATCAATCCTGACGAATGTGTTGCATATGGTGCAGCAGTT 6976 Query 452027 CAAGCAGC 452034 |||||||| Sbjct 6977 CAAGCAGC 6984 >seq276 Length=28560 Score = 93.3 bits (102), Expect = 2e-13 Identities = 95/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 560250 AAGAAGGTGATATGGGTAAAATTTATGGTTTTAACTGGAGACATTTTGGTGCTGATTATA 560309 ||||||||||| | ||| |||||||||||| | ||| |||| || || || | |||| Sbjct 20414 AAGAAGGTGATCTTGGTCCTATTTATGGTTTTCAATGGCGACACTTCGGCGCAAAATATA 20473 Query 560310 TTAATTGTAACACCAATTATACAGGAAAAGGATTTGATCAACTTGTTAAAATTATTGAGG 560369 || ||||||| || |||||||||| ||||| |||| ||||| | || || ||||| Sbjct 20474 TTGATTGTAAAACTGATTATACAGGTCAAGGAGTTGACCAACTAGCCAATATCATTGAAA 20533 Query 560370 AAAT 560373 |||| Sbjct 20534 AAAT 20537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975709337626664