Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pneumocystis_20jirovecii_20[genbank_20GCA_5F000333975.2_202012-12- 19] 358 sequences; 8,179,983 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq132 87.8 3e-12 >seq132 Length=47203 Score = 87.8 bits (96), Expect = 3e-12 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 155838 AAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAAAC 155897 |||||| | || |||||||| ||||| || || || || || || | ||| || Sbjct 38827 AAAACACTTACAGGAAAAACGATTACTTTGGAGGTGGAGTCGTCAGACACAATTGACAAT 38768 Query 155898 GTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTTAT 155957 || |||| || || |||||||||||||| || || || || |||||| | | || | | Sbjct 38767 GTCAAAAGCAAGATTCAAGATAAAGAAGGGATTCCACCGGATCAACAACGGCTAATCTTT 38708 Query 155958 GCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAAGAGGCG 156017 || || |||||| | || ||| ||||| | || ||||| ||||| ||||| || Sbjct 38707 GCTGGAAAGCAGTTGGAGGATGGAAGAACACTTTCTGATTACAATATCCAGAAAGAATCG 38648 Query 156018 ACGCTTCA 156025 || ||||| Sbjct 38647 ACTCTTCA 38640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731868724872800