Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pneumocystis_20jirovecii_20[genbank_20GCA_5F000333975.2_202012-12- 19] 358 sequences; 8,179,983 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq276 89.7 7e-13 >seq276 Length=28560 Score = 89.7 bits (98), Expect = 7e-13 Identities = 112/151 (74%), Gaps = 2/151 (1%) Strand=Plus/Plus Query 172476 AATGGTTCTCGTGAATTTTTAGATT-TATGCGGGTTTACTGAAAGAAAAGAAGGTGATTT 172534 |||||||| |||| | | || | ||| ||| || || ||| ||||||||||| | Sbjct 20368 AATGGTTCAAAAGAATATCTTGACTCTAT-CGGATTAACAGAACACCAAGAAGGTGATCT 20426 Query 172535 AGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATATATCGACTGTGATAC 172594 || || |||||||| ||||||||| |||| || || ||||||| || ||| | || Sbjct 20427 TGGTCCTATTTATGGTTTTCAATGGCGACACTTCGGCGCAAAATATATTGATTGTAAAAC 20486 Query 172595 AGATTACACAGGACAAGGAGTGGACCAATTA 172625 ||||| ||||| |||||||| |||||| || Sbjct 20487 TGATTATACAGGTCAAGGAGTTGACCAACTA 20517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632486769609040