Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pneumocystis_20jirovecii_20[genbank_20GCA_5F000333975.2_202012-12- 19] 358 sequences; 8,179,983 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq276 93.3 5e-14 >seq276 Length=28560 Score = 93.3 bits (102), Expect = 5e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 168649 AAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATA 168708 ||||||||||| | ||||| |||||||| ||||||||| |||| || || |||||| Sbjct 20414 AAGAAGGTGATCTTGGTCCTATTTATGGTTTTCAATGGCGACACTTCGGCGCAAAATATA 20473 Query 168709 TTGACTGTGATACAGATTACACCGGACAAGGAGTAGACCAATTA 168752 |||| ||| | || ||||| || || |||||||| |||||| || Sbjct 20474 TTGATTGTAAAACTGATTATACAGGTCAAGGAGTTGACCAACTA 20517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635174757580240