Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pneumocystis_20jirovecii_20[genbank_20GCA_5F000333975.2_202012-12- 19] 358 sequences; 8,179,983 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq103 648 2e-180 seq325 167 2e-35 seq189 132 4e-25 seq78 132 4e-25 seq151 118 8e-21 >seq103 Length=78968 Score = 648 bits (718), Expect = 2e-180 Identities = 1090/1566 (70%), Gaps = 16/1566 (1%) Strand=Plus/Plus Query 281330 GCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTATTAGTAATA 281389 |||||| |||||| | |||||||| || | || || | || | ||| | ||| Sbjct 73837 GCTTCTTGAATCATACGCTCAATTTCTTCCTTTGATAAACGACCTTTTTCATTCTTGATA 73896 Query 281390 GTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTG 281449 |||||||| | | ||| ||| ||| ||| | |||| ||||||||||| ||| Sbjct 73897 GTAATATTGCTTGTTTTACCTGTCCCTTTCTCAACAGCAGAGACATTAAGAATTGAATTA 73956 Query 281450 GCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCT 281509 ||||| | ||||| || |||||||||||||| || || | | |||||||| || ||| Sbjct 73957 GCATCAATGTCAAAAGTAACTTCAATTTGAGGAACACCACGAGGTGCAGGTGGAATGCCT 74016 Query 281510 TCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAA 281569 |||| |||| ||| || | |||||| || | ||||| || || | Sbjct 74017 GTTAAATCAAATTGTCCAAGTAAGTGGCAATCTTTGGTACGTGCACGTTCGCCTTCATAT 74076 Query 281570 ATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATTTTTTA 281629 | ||||||| || ||| || ||||||| |||||| | ||| ||| ||| |||||| Sbjct 74077 ACTTGGATAAGTACACCAGGCTGGTTATCTGCATAAGTAGAAAAGACTTCGGACTTTTTA 74136 Query 281630 CAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCTGTTTCTAAA 281689 || | ||||| || | | ||||| | ||||| | ||| || || ||||| | | Sbjct 74137 GTCGGGACAGTTGTATTCCGTTTAATAAGTGTTGTCATCACACCGCCTGCAGTTTCAATA 74196 Query 281690 CCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGA 281749 || | || ||||| | ||||||| | || || | |||| || ||| || | Sbjct 74197 CCCATTGAGAGAGGCGCCACATCAAGCAAGAGTATGTCTTGAGTTTGTTCCGATGTGTCT 74256 Query 281750 CCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACA 281809 || ||||||||| ||||||| || |||||||| |||||||||||||| ||||| | Sbjct 74257 CCTGAAAGAATAGCAGCTTGAACTGCCGCACCATAGGCAACAGCTTCATCTGGATTGATC 74316 Query 281810 GTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACCTTA---GGA 281866 ||| |||| | | ||| ||||| ||||||| ||| | || ||| | || ||| Sbjct 74317 GTTCTATTTGGCTCTTTTCCATTAAAAAAATCACAAACCAATT-TCTGAA--TACGCGGA 74373 Query 281867 ATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAA 281926 ||||| | || || ||||| |||||||||||||| || ||||||||| | ||| ||| Sbjct 74374 ATACGCGTAGAACCACCAACCAATACAATTTCATGAACACTTGATTTATCAATTTTAGAA 74433 Query 281927 TCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCT 281986 || | |||||| ||||| ||||| | | ||||| | ||| |||||||||| Sbjct 74434 TCACGAAGAACTTTCTCAACTGGTTCCATTGTTCCCCTAAAAAGATCTTGACAAAGTTCT 74493 Query 281987 TCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACT 282046 || ||| ||| | ||||| || || ||||||||||||| || || ||||||| | Sbjct 74494 TCAAATCGAGCACGAGTAATAGAAGTATATAAATCAATTCCTTCAAATAAGGAATCAATT 74553 Query 282047 TCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTT 282106 || || | || || || || || || || | ||||||||||| ||||||||||| | Sbjct 74554 TCTATACTCGTCTGTGTTGATGATGAAAGAGTCCGTTTAGCACGCTCACATGCTGTTCGA 74613 Query 282107 AGTCTTCGTAAGGCTTTTGCTGATTGATTCAAA--TCTGTTTTATATTTTCTCTTGAAAT 282164 || | || | | | ||| ||| | ||| ||| | || | ||| | || || | Sbjct 74614 AGCCGACGAAGAGATCGTGC--ATTCCCTGAAAGATCTTTCTTGTGTTTGCGTTTAAATT 74671 Query 282165 CTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTC 282224 | ||| | ||||||||||||| ||||||||||| |||||||| | |||| | Sbjct 74672 CAGCAATGAAGTGGTTTACAAGACGATTGTCAAAATCTTCTCCTCCCAAATGGGTATCGC 74731 Query 282225 CTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGG 282284 ||| || ||| | |||| |||| ||| ||||| | || || | | || ||| | Sbjct 74732 CTGCGGTTGCTTTGACTTCAAAAATTCCTTCTTCGATAGTTAATAACGATACGTCAAAAG 74791 Query 282285 TTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGAC 282344 |||| || || | |||||||||||| |||||| |||| || | || ||||| |||| Sbjct 74792 TTCCTCCTCCAAGATCAAAAATAAGCACATTCTTTTCATTTGATGTCTTCTTATCTAGAC 74851 Query 282345 CATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAA 282404 |||| |||| || || || || |||||||| ||||| | |||||||| | || |||| Sbjct 74852 CATATGCAATGGCTGCTGCTGTAGGTTCATTGATAATACGTAAAACATTCAATCCTGCAA 74911 Query 282405 TTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAA 282464 | |||||| ||||| || || |||| |||||||| || |||||||| || || || | Sbjct 74912 TCAATCCTGCGTCTTTCGTAGCCTGTCGCTGTGAATCATTGAAATATGCTGGGACCGTGA 74971 Query 282465 TAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTA 282524 |||| |||| | |||| | |||| ||| || ||| || |||||||| | | Sbjct 74972 TAACAGCATTGGAAACTTTAGTCCCAAGATACGCTTCTGCCACTTCCTTCATTTTTGTAA 75031 Query 282525 AAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGAT-TCATTTTGATATGATACT 282583 | |||||||||||| | || || | | | || || || || || |||| || Sbjct 75032 GGACCATTGATGAAATCTCCTCCGGCGTA-AATGTTTTAATATCCCCTTTATATTCAACC 75090 Query 282584 TCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGAT 282643 | || ||| || || | ||| | ||||||||||| ||||||| ||||||||||||| Sbjct 75091 TGAATATAAGGCTTCTGACCTTTGTCTATAACTTTAAAAGGCCAATGTTTCATATCTGAT 75150 Query 282644 TGAACACTT-TGG-TCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTAT 282701 || ||||| ||| || || | | ||||| | |||||||||||||| | |||| Sbjct 75151 TG--CACTTCTGGATCCCCGAATTTCCGTCCAATCAGACGTTTTGCATCAAATACTGTAT 75208 Query 282702 TGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTG 282761 || |||||| | |||| | || | ||| |||||||||||||| || ||||| |||| Sbjct 75209 TGCATGGATTCATTGCAACCTGGTTTTTTGCTGCATCTCCAATAAGTCTTTCTGAATCTG 75268 Query 282762 TAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTT 282821 |||| | ||||||||||| || || ||||| |||||||||||||| ||||| || || | Sbjct 75269 TAAACGCTACATATGATGGTGTGGTTCGATTCCCTTGATCATTCGCTATAATCTCTACAT 75328 Query 282822 TACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGCAA 282881 || | |||||| || || || ||| || ||||||||||||||||||| |||| Sbjct 75329 GTCCTGATATCCATACTCCCACGCATGAAAACGTGGTTCCTAAATCAATACCAACTGCAA 75388 Query 282882 TTTTAT 282887 |||| Sbjct 75389 AATTAT 75394 >seq325 Length=14064 Score = 167 bits (184), Expect = 2e-35 Identities = 369/545 (68%), Gaps = 30/545 (6%) Strand=Plus/Minus Query 400262 ATGCTCACAAAGCAGGAACCAAAGAAGGATATAAATGTACCCTAATTTTGACAGAGGGAG 400321 ||||| | ||||| ||||| || ||||| |||||||||| || ||||| || || || | Sbjct 12257 ATGCTAATAAAGCTGGAACTAAGGAAGGTCATAAATGTACACTTATTTTAACTGAAGGTG 12198 Query 400322 ATTCAGCTAAAACATTCGCTATGTCTGGCCTTAATGTTATTGGAAGAGATTATTATGGAG 400381 |||| || ||| | || ||||||||||| || ||| |||| | ||||||| ||||| Sbjct 12197 ATTCTGCAAAATCTTTAGCTATGTCTGGTATTGGTGTGGTTGGTCGCGATTATTTTGGAG 12138 Query 400382 TTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGGGATGCTAGTCCTaaaaaaaTTGCCG 400441 ||| || |||||||||||| | || |||||| | || || | | || ||||| | Sbjct 12137 TTTATCCGCTTAGAGGAAAATTGTTAAATGTTCGTGAAGCATCACATGAACAAATTAGCA 12078 Query 400442 ATAATGAGGAAATTACAGCAATCaaaaaaaTTGTTGGACTTGAACAAGGAAAAGTTTATG 400501 | |||| ||||||| || || || ||||| | || ||| |||| ||| || ||| Sbjct 12077 AAAATGCTGAAATTAATGCTATAAAGCAAATTATGGGCCTTCAACATAAAAAGGTATATA 12018 Query 400502 AT----GATCTCAAAGGTTTACGATATGGTAGTATTATGATTCTTGCTGATCAAGATGTT 400557 | ||| || ||||| ||||| | | |||||| | ||||||||||| | Sbjct 12017 CTTCTACTTCTGAA----TTACGCTATGGGCATTTGATGATTATGACTGATCAAGATCAT 11962 Query 400558 GATGGGTACCATATCAAAGGATTAATCATGAATTTTATCCATTGTTTTTGGCCATCTCTT 400617 |||||| ||||| || || || || || |||| | | | ||| | |||||| || Sbjct 11961 GATGGGAGTCATATTAAGGGTTTGATTATTAATTATTTGGAAAGTTCGTTTCCATCT-TT 11903 Query 400618 GTT--AAATACGAAGGGTTTATTCAATCA-TTTGCAACTCCACTATTAAAAGCCACCAAA 400674 || | |||| ||| || || | | | ||| |||||| | ||||||| || ||| Sbjct 11902 ATTGGAGATAC--CGGGATTTTTAATTGAGTTTATTACTCCAATTGTAAAAGCAACAAAA 11845 Query 400675 GGAA--AAGGTAAAACAAAACAAGTTGTTGCATTTACAAGTCCCCAATCTTTTGAGGAAT 400732 |||| ||| |||| | ||| ||||| | |||| | | |||| | | Sbjct 11844 GGAACTCAGG------AAAAGACGTT-----TTTTACTA-TCCCTGA--GTATGAGTATT 11799 Query 400733 GGAAAAAGGAAAACAATGACGGAAAAGGATGGTCAATCAAATATTACAAAGGATTAGGTA 400792 |||| || || | | ||||| ||| ||| |||||||| ||||||||||||| Sbjct 11798 GGAAGGAGTCTGTTGATAATGCTAAAGGGTGGAAAATAAAATATTATAAAGGATTAGGTA 11739 Query 400793 CCAGT 400797 | ||| Sbjct 11738 CTAGT 11734 >seq189 Length=26291 Score = 132 bits (146), Expect = 4e-25 Identities = 247/361 (68%), Gaps = 4/361 (1%) Strand=Plus/Minus Query 281762 GCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGT 281821 |||||||||| || ||||||||||||||| ||| |||||||| | | || ||| || Sbjct 6984 GCTGCTTGAACTGCTGCACCATATGCAACACATTCGTCAGGATTGATGGATTTATTAAGA 6925 Query 281822 TTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCT--TACCTTAGGAATACGAGATGATC 281879 ||| || | ||||||| |||| |||| | ||| | |||||||||| ||||| Sbjct 6924 GATTTTCCGTCAAAAAAATCAGAAACGAGTTTTTGAATACGT--GGAATACGAGTTGATC 6867 Query 281880 CTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTT 281939 | ||||| || ||||| |||| | | |||||||| | ||||||||| | ||||| Sbjct 6866 CACCAACCAAAACAATATCATCAATTTTAGATTTATCTATTTTTGAATCTTTAAGAACTT 6807 Query 281940 TTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTC 281999 ||||||| || |||||| | | ||| | | |||| || ||||| || || | Sbjct 6806 TTTCAACAGGCTCAAGAGTTGATTGAAAGACTTTTGAATTAATCTCTTCAAAACGTGCAC 6747 Query 282000 TAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTT 282059 | ||| | | | | || ||| || || || || |||| ||||| ||||||| Sbjct 6746 GATTAATATTAATACTAAGATCTTGACCATCTTTTAATGACTCAATTTCAACTGTAGTTT 6687 Query 282060 GAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGG 282119 | || | |||| || | ||||||||||| ||||| || |||| | ||||| | Sbjct 6686 GTGTAACACTGGATAATGTTCTCTTAGCACGTTCGCATGCAGTTCTTAAACGCCGTAAAG 6627 Query 282120 C 282120 | Sbjct 6626 C 6626 Score = 107 bits (118), Expect = 1e-17 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 282275 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT 282334 |||||| || || || |||| |||||||||||| ||||| ||||||| || ||| Sbjct 6376 ACATCAAATGTACCGCCCCCCAAATCAAAAATAAGAACATTTTTTTCTTTATCAGATTTT 6317 Query 282335 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 282394 |||||||||||| |||| || || ||||| || ||||| ||||| | | ||| || Sbjct 6316 GAATCAAGACCATATGCAATTGCTGCCGCAGTAGGCTCATTGATAATACGGAGAACGTTT 6257 Query 282395 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 282454 | ||| ||||| | |||||||| || || | | | || ||| ||||||||| Sbjct 6256 AAACCGGCAATAGTGCCTGCATCCTTTGTTGAAAGACGCTGACTATCAGAAAAATATGCT 6197 Query 282455 GGAACAGTAATAACGGC 282471 || || |||||||| || Sbjct 6196 GGTACTGTAATAACTGC 6180 >seq78 Length=127363 Score = 132 bits (146), Expect = 4e-25 Identities = 313/464 (67%), Gaps = 8/464 (2%) Strand=Plus/Plus Query 282417 CTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTG 282476 |||| || ||||| | ||| | ||| || ||||| || || || |||| || |||| | Sbjct 120009 CTTTGGTTGCTTGACGTTGCGCATCATTGAAATAAGCGGGTACTGTAACTACCGCATGGG 120068 Query 282477 TTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATG 282536 | || |||| ||| || ||| ||| ||||||||||| | | ||| | | Sbjct 120069 TAACCGTCCGACCAAGATATGCTTCAGCTATTTCTTTCATTTTACGAAGCACCATAGCAG 120128 Query 282537 AAATTTGTTCTGGAGAATATTGCTTGGATTCATTTTG--ATATGATACTTCAAAATATGG 282594 |||||| ||| || | | | | | ||| | | |||| | ||||||| || || Sbjct 120129 AAATTTCTTCCGGTGTAAACATCCTCTTTTC-TCCAGCAATATTA-ACTTCAACATGCGG 120186 Query 282595 TTTATTACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTG 282654 || | || || ||| || |||||||||| |||||||| | ||||| || Sbjct 120187 CTTCCCATCACGATGCGAAACCTTGAATGGCCAATGCTTCATATCCGCCTGAACGTCTTC 120246 Query 282655 GTCATTAAAATCTC-TACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAA 282713 |||| ||| |||| | ||||| | || || ||||||||| ||| || |||||| Sbjct 120247 CTCATCAAA-TCTCCTGCCAATCAGCCGCTTGACATCAAAAACAGTGTTTTGTGGATTTG 120305 Query 282714 CTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACAT 282773 | |||||| | ||| || ||||| |||| || | ||| || ||||| | ||||| Sbjct 120306 TCGGAGCTTGGTTTTTCGCAGCATCCCCAACCAACCGCTCTTCATCAGTAAAGGCAACAT 120365 Query 282774 ATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCC 282833 |||| || ||| | ||||| || ||||| || || | |||||||||| || | | Sbjct 120366 ATGACGGCGTTATACGATTGCCCTGATCGTTTGCCAAAATTTCAACTCGTCC-TGACAAC 120424 Query 282834 ATA-CACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAAT 282876 ||| |||| ||||| | |||| || || |||||||||||||| Sbjct 120425 ATAACACCAACACATGAATAAGTCGTCCCCAAATCAATACCAAT 120468 Score = 123 bits (136), Expect = 2e-22 Identities = 393/599 (66%), Gaps = 18/599 (3%) Strand=Plus/Plus Query 281308 ATCTGCTTCTTCAAA-TTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGA 281366 |||| | ||| |||| |||| | || || |||||| | |||||||| |||| || | Sbjct 118773 ATCTTCATCTGCAAACTTCTCT-GCATCCTGAATCATACGCTCAATTTCCTCTTGCGACA 118831 Query 281367 ATCTTCCGCGATTATTAGTAATAGTAAT--ATTCTTGGATTTGTTTGTTGATTTATCAGC 281424 | || || ||| | |||||||| ||||| ||||| |||||| | Sbjct 118832 GCCGACCCTTATCATTCTTGATAGTAATTGATTCT--GATTTACCACCACCTTTATCTGT 118889 Query 281425 GGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGAC 281484 |||| ||| | | | ||||||||||| | ||||| || |||||||| ||||| || Sbjct 118890 TGCAGACACTGTTAATACCCCATTGGCATCAAGCTCAAACGTCACTTCAATCTGAGGCAC 118949 Query 281485 CCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTT 281544 || | |||| || || || ||| || | |||| | |||| | ||||||||||| Sbjct 118950 ACCACGTGGAGCTGGAGGTATTCCTGTTAACTCAAATTTGCCCAACATGTTATTATCTTT 119009 Query 281545 AGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATA 281604 || | || || ||||| || | ||| || ||| | ||||||||| || Sbjct 119010 TGTAAGAGAGCGCTCGCCCTCAAACACTTGAATCAAAACGGTATCTTGATTATCAGATGC 119069 Query 281605 AGTTGTAAATACTCTG-GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGG 281663 ||| | ||| | |||| ||||| |||||| ||| || | ||| | || | Sbjct 119070 AGTGGAAAAGA-TCTGTGATTTACGTGTCGGAATTACTGTATTGCGTGAAATTAGTTTAG 119128 Query 281664 TCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAA 281723 |||| | ||||||| ||| || | || | || | ||| | ||||| |||| ||||| Sbjct 119129 TCATTACGCCACCAGTTGTCTCAATTCCTAAAGTCAATGGATTTACATCGACTAAGACAA 119188 Query 281724 TATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCAT 281783 ||| | || || || |||| | | |||| | | || | || |||||||| Sbjct 119189 TATCCTCAA------CACCATCTTGATGAGATAAAATACCACCCTGCACAGTAGCACCAT 119242 Query 281784 ATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT--T 281841 | || || |||||||| ||||||| | || | | ||| || ||| | |||| || Sbjct 119243 ACGCTACTGCTTCATCTGGATTAATACCTTTAGAGACTTTCTTTCCA-TCAAAATATGCC 119301 Query 281842 TGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCAT 281900 | || |||||| ||| ||||| || || | |||||| || ||||| ||||| |||| Sbjct 119302 TCCAA-TAGTTGTTGTACTTTAGGGATTCGTGTTGATCCGCCGACTAAAACAATGTCAT 119359 >seq151 Length=20182 Score = 118 bits (130), Expect = 8e-21 Identities = 110/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 435133 GAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAACT 435192 |||||||||||||| | ||||| ||||| ||||| | ||| |||| ||| |||||||| Sbjct 5950 GAATTTTTCTTCCATGCTATGGCAGGTCGAGAAGGATTAATTGATACTGCTGTTAAAACT 5891 Query 435193 GCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGATATTAAACAAGAA 435252 ||||| || ||||||||||||||| ||||| || ||||||||| ||| | || Sbjct 5890 GCTGAAACAGGTTATATTCAAAGACGTCTTGTTAAAGCTCTTGAAGATGTTATGGTAAAA 5831 Query 435253 TATGATGGTACAGTGAGAAA 435272 ||||||||||| || || || Sbjct 5830 TATGATGGTACTGTTAGGAA 5811 Score = 107 bits (118), Expect = 1e-17 Identities = 125/169 (74%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 432287 AGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACG 432346 |||||||||||| | | ||||||||||||||||| || ||||| ||| | ||||| || Sbjct 7394 AGGTAAAGAAGGGAGATTAAGAGGAAATTTGATGGGTAAACGTGTTGATTTTTCTGCTCG 7335 Query 432347 TACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTAT 432406 ||||| |||||| |||||| ||| | ||||| ||||| |||||||||| | ||| Sbjct 7334 AACAGTGATTACTGGTGATCCGAATTTGTCTCTCGATGAACTTGGTGTTCCAAGAAGTAT 7275 Query 432407 TGCGAAAAATCTTACTTTTGACGAAATTGTAACAGAACATAATATTGAT 432455 ||| | |||||| | |||| |||||| | |||| ||| || Sbjct 7274 TGCTCGTATTCTTACATACCCTGAAACTGTAACTCCATATAACATTCAT 7226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740612823712908