Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pneumocystis_20jirovecii_20[genbank_20GCA_5F000333975.2_202012-12- 19] 358 sequences; 8,179,983 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq29 86.0 1e-11 >seq29 Length=6877 Score = 86.0 bits (94), Expect = 1e-11 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 143016 CATATAGAACTTAGGAGATGGGCGGATGTTTTTCTTATAGCGCCCTTAACGGCAAATACG 143075 ||||| ||||| || ||||||| ||| | || | |||| || ||||| |||||||| Sbjct 5637 CATATTGAACTACGGCGATGGGCAGATATACTTGTATTAGCACCATTAACAGCAAATACA 5696 Query 143076 TTAGCAAAAATAGCCAACGGTATATGCGATAATTTACTAACATCTATAGTAAGAGCCTGG 143135 | |||||||| || || || ||||||||||| || |||||| |||| || | || ||| Sbjct 5697 CTGGCAAAAATGGCAAATGGATTATGCGATAATCTATTAACATGTATATTACGTGCATGG 5756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903407157234880