Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protomyces_20lactucaedebilis_20[genbank_20GCA_5F002105105.1_202017-
04-20] 44 sequences; 12,928,838 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq43 98.7 8e-16
>seq43
Length=605699
Score = 98.7 bits (108), Expect = 8e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184
|| |||||||||| || |||||||||||||||||||||| || |||| | ||
Sbjct 450439 AACACCAAGTGCAATGTTGACTCCTTCTGAATGTTGTAGTCGGCCAAAGTGCGACCATCC 450498
Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
|| || || ||||| || || || | ||||| ||||| || || | ||| ||||||||
Sbjct 450499 TCAAGCTGCTTTCCAGCAAAGATGAGACGCTGCTGGTCAGGTGGAATACCTTCCTTGTCT 450558
Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304
||| || ||| || | | | |||| ||| ||||| | || || |||
Sbjct 450559 TGAATCTTGCTCTTGACGTTGTCAATGGTGTCTGATGACTCTACCTCGAGTGTGATGGTC 450618
Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || ||||||||||| || || ||||||||
Sbjct 450619 TTTCCAGTCAGAGTCTTGACGAAAATTTGCAT 450650
Score = 96.9 bits (106), Expect = 3e-15
Identities = 133/186 (72%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||||||||| ||||||||||| ||| |||| | || || || || || || |||||
Sbjct 451371 CTCCTTCTGGATGTTGTAGTCTGCAAGTGTGCGACCATCTTCAAGCTGCTTACCAGCGAA 451430
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
||||| ||||| ||||| || || | || ||||||||| |||||| ||| ||
Sbjct 451431 AATCAAACGCTGCTGGTCCGGTGGAATCCCTTCCTTGTCCTGAATTTTCGACTTGACATT 451490
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
| | | |||| || ||||| | |||||| |||||||| || || ||||| ||
Sbjct 451491 GTCAATGGTGTCTGAGGATTCAACCTCAAGGGTAATGGTCTTGCCAGTAAGTGTCTTGAC 451550
Query 45325 AAAGAT 45330
||||||
Sbjct 451551 AAAGAT 451556
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395074988140924
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |